PlantSME Plant secondary metabolism enzyme database

Nelumbo nucifera (nelumbo_nucifera)

Imported from atlas release summary for Nelumbo nucifera.

1227
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 18 BAHD (128) View species results
Phenylpropanoid pathway 309 11 POD (137) View species results
Alkaloid pathway 267 19 NMT (38) View species results
Flavonoid pathway 162 8 UFGT (81) View species results
Rosmarinic acid pathway 110 7 C4H (33) View species results
Steroid pathway 69 11 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
Reset
Gene Pathway Family Confidence Status
Nnucmegascaffold_10003520.1 Alkaloid H6H medium borderline
Nnucmegascaffold_100058320.1 Alkaloid H6H medium borderline
Nnucmegascaffold_100060010.1 Alkaloid H6H high pass
Nnucmegascaffold_10011540.1 Alkaloid H6H medium pass
Nnucmegascaffold_10020460.1 Alkaloid H6H medium borderline
Nnucmegascaffold_10025000.1 Alkaloid H6H high pass
Nnucmegascaffold_10040300.1 Alkaloid H6H low borderline
Nnucmegascaffold_10046630.1 Alkaloid H6H high pass
Nnucmegascaffold_160084210.1 Alkaloid H6H low borderline
Nnucmegascaffold_20097510.1 Alkaloid H6H low borderline
Nnucmegascaffold_20102840.1 Alkaloid H6H medium borderline
Nnucmegascaffold_20107940.1 Alkaloid H6H medium borderline
Nnucmegascaffold_20112060.1 Alkaloid H6H medium borderline
Nnucmegascaffold_20112070.1 Alkaloid H6H low borderline
Nnucmegascaffold_20114300.1 Alkaloid H6H low borderline
Nnucmegascaffold_20123020.1 Alkaloid H6H low borderline
Nnucmegascaffold_20129140.1 Alkaloid H6H low borderline
Nnucmegascaffold_20130130.1 Alkaloid H6H medium borderline
Nnucmegascaffold_30142530.1 Alkaloid H6H low borderline
Nnucmegascaffold_30154480.1 Alkaloid H6H medium borderline
Nnucmegascaffold_40169170.1 Alkaloid H6H medium borderline
Nnucmegascaffold_40169200.1 Alkaloid H6H medium borderline
Nnucmegascaffold_40173900.1 Alkaloid H6H low borderline
Nnucmegascaffold_60222770.1 Alkaloid H6H high pass
Nnucmegascaffold_60223390.1 Alkaloid H6H low borderline
Nnucmegascaffold_60224480.1 Alkaloid H6H low borderline
Nnucmegascaffold_60229570.1 Alkaloid H6H low borderline
Nnucmegascaffold_80244080.1 Alkaloid H6H medium borderline
Nnucmegascaffold_80246550.1 Alkaloid H6H low borderline
Nnucmegascaffold_80250080.1 Alkaloid H6H low borderline
Nnucmegascaffold_80251780.1 Alkaloid H6H low borderline
Nnucmegascaffold_80253550.1 Alkaloid H6H medium pass
Nnucmegascaffold_90256490.1 Alkaloid H6H medium borderline
Nnucmegascaffold_90261050.1 Alkaloid H6H low borderline
Nnucmegascaffold_90264230.1 Alkaloid H6H medium borderline
Nnucmegascaffold_90264240.1 Alkaloid H6H medium borderline