PlantSME Plant secondary metabolism enzyme database

Nelumbo nucifera (nelumbo_nucifera)

Imported from atlas release summary for Nelumbo nucifera.

1227
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 18 BAHD (128) View species results
Phenylpropanoid pathway 309 11 POD (137) View species results
Alkaloid pathway 267 19 NMT (38) View species results
Flavonoid pathway 162 8 UFGT (81) View species results
Rosmarinic acid pathway 110 7 C4H (33) View species results
Steroid pathway 69 11 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Nnucmegascaffold_210132330.1 Flavonoid ANR medium borderline
Nnucmegascaffold_30143240.1 Flavonoid ANR medium borderline
Nnucmegascaffold_30152420.1 Flavonoid ANR medium borderline
Nnucmegascaffold_40167160.1 Flavonoid ANR medium pass
Nnucmegascaffold_40167170.1 Flavonoid ANR high pass
Nnucmegascaffold_40176110.1 Flavonoid ANR medium pass
Nnucmegascaffold_50201840.1 Flavonoid ANR medium borderline
Nnucmegascaffold_50204910.1 Flavonoid ANR low borderline
Nnucmegascaffold_50207060.1 Flavonoid ANR medium pass
Nnucmegascaffold_620229930.1 Flavonoid ANR low borderline
Nnucmegascaffold_70237250.1 Flavonoid ANR medium borderline
Nnucmegascaffold_80253730.1 Flavonoid ANR medium borderline
Nnucmegascaffold_10046620.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_130072170.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_20098890.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_20099330.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_510208900.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_60217140.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_70239310.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_80250080.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_80255620.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_90256510.1 Flavonoid ANS/LDOX medium borderline
Nnucmegascaffold_10045120.1 Flavonoid C4H low borderline
Nnucmegascaffold_10047000.1 Flavonoid C4H low borderline
Nnucmegascaffold_150081370.1 Flavonoid C4H medium borderline
Nnucmegascaffold_20102460.1 Flavonoid C4H medium borderline
Nnucmegascaffold_20102470.1 Flavonoid C4H medium borderline
Nnucmegascaffold_20118570.1 Flavonoid C4H low borderline
Nnucmegascaffold_30138490.1 Flavonoid C4H medium borderline
Nnucmegascaffold_50192860.1 Flavonoid C4H low borderline
Nnucmegascaffold_80247180.1 Flavonoid C4H medium borderline
Nnucmegascaffold_90256920.1 Flavonoid C4H low borderline
Nnucmegascaffold_150081500.1 Flavonoid CHI medium pass
Nnucmegascaffold_260136190.1 Flavonoid CHI low borderline
Nnucmegascaffold_30138650.1 Flavonoid CHI medium pass
Nnucmegascaffold_30140320.1 Flavonoid CHI medium pass
Nnucmegascaffold_30161020.1 Flavonoid CHI medium pass
Nnucmegascaffold_30162210.1 Flavonoid CHI low borderline
Nnucmegascaffold_40182860.1 Flavonoid CHI medium pass
Nnucmegascaffold_10013700.1 Flavonoid CHS medium pass
Nnucmegascaffold_10013720.1 Flavonoid CHS medium pass
Nnucmegascaffold_10013740.1 Flavonoid CHS medium pass
Nnucmegascaffold_10013750.1 Flavonoid CHS medium pass
Nnucmegascaffold_10025060.1 Flavonoid CHS medium pass
Nnucmegascaffold_10043640.1 Flavonoid CHS medium pass
Nnucmegascaffold_20095670.1 Flavonoid CHS medium pass
Nnucmegascaffold_50189140.1 Flavonoid CHS medium pass
Nnucmegascaffold_10031370.1 Flavonoid DFR medium borderline
Nnucmegascaffold_10039630.1 Flavonoid DFR medium borderline
Nnucmegascaffold_10047800.1 Flavonoid DFR low borderline