Nelumbo nucifera (nelumbo_nucifera)
Imported from atlas release summary for Nelumbo nucifera.
1227
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1227
Candidate Genes
C4H
6.13%
BAHD
5.87%
C3'H/CYP98A
5.41%
POD
5.08%
4CL
4.23%
IFS
3.9%
UGT
3.48%
T3O
3.11%
Other Families
62.79%
More Families (94)
CYP76
94
3.08%
7DLGT
92
3.02%
UFGT
85
2.79%
F3H
76
2.49%
NMT
73
2.39%
DWF4/CYP90B1
71
2.33%
STR
68
2.23%
BR6OX2/CYP85A2
53
1.74%
PAL
51
1.67%
CODM/T6ODM
49
1.61%
F3'H/CYP75B
48
1.57%
SMT1/SMT2/SMT3
43
1.41%
TRI/TRII
40
1.31%
CAD
39
1.28%
CSE
37
1.21%
H6H
36
1.18%
SGD
36
1.18%
PYKS
35
1.15%
LAC
34
1.11%
CAS
34
1.11%
CYP71
32
1.05%
7DLH
31
1.02%
HCT
30
0.98%
T16H
28
0.92%
IFR
28
0.92%
COMT
27
0.89%
RAS
25
0.82%
CYP90D1
25
0.82%
FNS
23
0.75%
PMT
21
0.69%
G8O/G8H
20
0.66%
8HGO
20
0.66%
GS
20
0.66%
F5H/CYP84A
20
0.66%
IO
19
0.62%
GES
19
0.62%
ANR
19
0.62%
DFR
19
0.62%
TYDC_DDC
18
0.59%
LAMT
18
0.59%
CCR
18
0.59%
TPS
18
0.59%
16OMT
17
0.56%
CPD/CYP90A1
17
0.56%
COR
15
0.49%
F3'5'H/CYP75A
14
0.46%
BR6OX1/CYP85A1
14
0.46%
NCS
13
0.43%
CYP51G1
13
0.43%
GGPPS
13
0.43%
BBE
12
0.39%
SLS
12
0.39%
ANS/LDOX
10
0.33%
CPR
10
0.33%
ISY
8
0.26%
CHS
8
0.26%
TAT
8
0.26%
FPPS
8
0.26%
ODC
7
0.23%
TDC
7
0.23%
CHI
7
0.23%
CCoAOMT
7
0.23%
HPPR
7
0.23%
MVD
7
0.23%
CNMT
6
0.2%
CYP719
6
0.2%
MPO
6
0.2%
ROT3/CYP90C1
6
0.2%
SMO1/SMO2
5
0.16%
AACT
5
0.16%
HDS/IspG
5
0.16%
MVK
5
0.16%
SQS/FDFT1
4
0.13%
SQE
4
0.13%
DET2
4
0.13%
CYP80B1
3
0.1%
XMT_MXMT_DXMT
3
0.1%
DXS
3
0.1%
HMGR
3
0.1%
ADC
2
0.07%
FLS
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
HMGS
2
0.07%
HDR/IspH
2
0.07%
FK
1
0.03%
CPI1
1
0.03%
DWF1
1
0.03%
PMK
1
0.03%
MDS/IspF
1
0.03%
MCT/IspD
1
0.03%
DXR
1
0.03%
CMK/IspE
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 310 | 18 | BAHD (128) | View species results |
| Phenylpropanoid pathway | 309 | 11 | POD (137) | View species results |
| Alkaloid pathway | 267 | 19 | NMT (38) | View species results |
| Flavonoid pathway | 162 | 8 | UFGT (81) | View species results |
| Rosmarinic acid pathway | 110 | 7 | C4H (33) | View species results |
| Steroid pathway | 69 | 11 | CAS (32) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1092 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 234 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Nnucmegascaffold_150082080.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Nnucmegascaffold_150082570.1 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Nnucmegascaffold_150083010.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Nnucmegascaffold_160084070.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Nnucmegascaffold_170086720.1 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| Nnucmegascaffold_180088970.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Nnucmegascaffold_200130620.1 | Terpenoid | BAHD | medium | pass | BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC |
| Nnucmegascaffold_20091010.1 | Terpenoid | BAHD | low | borderline | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| Nnucmegascaffold_20092620.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| Nnucmegascaffold_20093980.1 | Terpenoid | BAHD | medium | pass | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| Nnucmegascaffold_20094120.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Nnucmegascaffold_20094160.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Nnucmegascaffold_20098160.1 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Nnucmegascaffold_20098720.1 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Nnucmegascaffold_20100010.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| Nnucmegascaffold_20102260.1 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Nnucmegascaffold_20104260.1 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Nnucmegascaffold_20104400.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Nnucmegascaffold_20109110.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Nnucmegascaffold_20109400.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Nnucmegascaffold_20109460.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Nnucmegascaffold_20109470.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Nnucmegascaffold_20110010.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Nnucmegascaffold_20110840.1 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Nnucmegascaffold_20111920.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Nnucmegascaffold_20111930.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Nnucmegascaffold_20114550.1 | Terpenoid | BAHD | low | borderline | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| Nnucmegascaffold_20116940.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Nnucmegascaffold_20117820.1 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| Nnucmegascaffold_20118790.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Nnucmegascaffold_20119190.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Nnucmegascaffold_20120960.1 | Terpenoid | BAHD | low | borderline | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Nnucmegascaffold_20120970.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Nnucmegascaffold_20121150.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Nnucmegascaffold_20122390.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Nnucmegascaffold_20127020.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Nnucmegascaffold_20127160.1 | Terpenoid | BAHD | medium | pass | BAHD__00075__sp_Q9FJB4_GPC1_ARATH |
| Nnucmegascaffold_20127350.1 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Nnucmegascaffold_20127400.1 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| Nnucmegascaffold_20129470.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Nnucmegascaffold_20130220.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Nnucmegascaffold_250135300.1 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Nnucmegascaffold_270136650.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Nnucmegascaffold_270136660.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Nnucmegascaffold_290137830.1 | Terpenoid | BAHD | medium | pass | BAHD__00069__sp_Q9C5W0_DGAT3_ARATH |
| Nnucmegascaffold_290137910.1 | Terpenoid | BAHD | medium | pass | BAHD__00084__sp_Q9M115_ZDH16_ARATH |
| Nnucmegascaffold_30141560.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Nnucmegascaffold_30144500.1 | Terpenoid | BAHD | medium | pass | BAHD__00063__sp_Q93VV0_ZDHC6_ARATH |
| Nnucmegascaffold_30144560.1 | Terpenoid | BAHD | medium | pass | BAHD__00071__sp_Q9CAY3_GPAT5_ARATH |
| Nnucmegascaffold_30146120.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |