PlantSME Plant secondary metabolism enzyme database

Oryza meridionalis (oryza_meridionalis)

Imported from atlas release summary for Oryza meridionalis.

1703
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 530 18 BAHD (211) View species results
Alkaloid pathway 389 26 7DLGT (56) View species results
Phenylpropanoid pathway 264 13 POD (96) View species results
Flavonoid pathway 238 12 UFGT (147) View species results
Steroid pathway 146 13 SMT1/SMT2/SMT3 (57) View species results
Rosmarinic acid pathway 136 7 C4H (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1757 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 374 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
OMERI01G07280.1 Phenylpropanoid CSE medium pass
OMERI01G07290.1 Phenylpropanoid CSE medium pass
OMERI01G12500.1 Phenylpropanoid CSE medium pass
OMERI01G24860.1 Phenylpropanoid CSE medium pass
OMERI01G37210.1 Phenylpropanoid CSE low borderline
OMERI01G37210.2 Phenylpropanoid CSE low borderline
OMERI01G37210.3 Phenylpropanoid CSE low borderline
OMERI01G37210.4 Phenylpropanoid CSE low borderline
OMERI01G37210.5 Phenylpropanoid CSE low borderline
OMERI01G42180.1 Phenylpropanoid CSE medium pass
OMERI02G08850.1 Phenylpropanoid CSE medium pass
OMERI02G15890.1 Phenylpropanoid CSE medium pass
OMERI02G15890.2 Phenylpropanoid CSE medium pass
OMERI02G28950.1 Phenylpropanoid CSE medium pass
OMERI03G18910.1 Phenylpropanoid CSE low borderline
OMERI04G04000.1 Phenylpropanoid CSE medium pass
OMERI04G04110.1 Phenylpropanoid CSE medium pass
OMERI04G06380.1 Phenylpropanoid CSE medium pass
OMERI04G06570.1 Phenylpropanoid CSE medium pass
OMERI04G22980.1 Phenylpropanoid CSE medium pass
OMERI04G22980.2 Phenylpropanoid CSE medium pass
OMERI04G24530.1 Phenylpropanoid CSE medium pass
OMERI05G00730.1 Phenylpropanoid CSE medium pass
OMERI05G11990.1 Phenylpropanoid CSE medium pass
OMERI05G12010.1 Phenylpropanoid CSE medium pass
OMERI05G19880.1 Phenylpropanoid CSE low borderline
OMERI06G12100.3 Phenylpropanoid CSE medium pass
OMERI06G12100.5 Phenylpropanoid CSE low borderline
OMERI06G12110.1 Phenylpropanoid CSE medium pass
OMERI07G00160.1 Phenylpropanoid CSE medium pass
OMERI07G04390.2 Phenylpropanoid CSE medium pass
OMERI07G04390.6 Phenylpropanoid CSE medium pass
OMERI07G04390.7 Phenylpropanoid CSE medium pass
OMERI07G11130.1 Phenylpropanoid CSE medium pass
OMERI07G15680.1 Phenylpropanoid CSE medium pass
OMERI08G18200.1 Phenylpropanoid CSE medium pass
OMERI09G03850.1 Phenylpropanoid CSE medium pass
OMERI09G09330.1 Phenylpropanoid CSE medium pass
OMERI09G14870.1 Phenylpropanoid CSE medium pass
OMERI11G07520.1 Phenylpropanoid CSE medium pass
OMERI12G05760.1 Phenylpropanoid CSE medium pass