PlantSME Plant secondary metabolism enzyme database

Oryza meridionalis (oryza_meridionalis)

Imported from atlas release summary for Oryza meridionalis.

1703
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 530 18 BAHD (211) View species results
Alkaloid pathway 389 26 7DLGT (56) View species results
Phenylpropanoid pathway 264 13 POD (96) View species results
Flavonoid pathway 238 12 UFGT (147) View species results
Steroid pathway 146 13 SMT1/SMT2/SMT3 (57) View species results
Rosmarinic acid pathway 136 7 C4H (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1757 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 374 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
OMERI02G14780.4 Flavonoid ANS/LDOX medium borderline
OMERI02G14780.5 Flavonoid ANS/LDOX medium borderline
OMERI04G22560.1 Flavonoid ANS/LDOX medium borderline
OMERI06G06100.1 Flavonoid ANS/LDOX medium borderline
OMERI06G06100.2 Flavonoid ANS/LDOX medium borderline
OMERI06G06120.1 Flavonoid ANS/LDOX medium borderline
OMERI10G04010.1 Flavonoid ANS/LDOX low borderline
OMERI10G14670.1 Flavonoid ANS/LDOX medium borderline
OMERI10G14690.1 Flavonoid ANS/LDOX medium borderline
OMERI10G14710.1 Flavonoid ANS/LDOX medium borderline
OMERI01G32430.1 Flavonoid C4H medium borderline
OMERI02G15790.1 Flavonoid C4H medium borderline
OMERI02G15800.1 Flavonoid C4H medium borderline
OMERI03G26680.1 Flavonoid C4H low borderline
OMERI06G14580.1 Flavonoid C4H low borderline
OMERI06G19270.1 Flavonoid C4H medium borderline
OMERI06G19270.3 Flavonoid C4H medium borderline
OMERI06G19270.4 Flavonoid C4H medium borderline
OMERI06G19270.5 Flavonoid C4H medium borderline
OMERI06G19270.6 Flavonoid C4H medium borderline
OMERI06G19270.7 Flavonoid C4H medium borderline
OMERI06G19270.8 Flavonoid C4H medium borderline
OMERI07G20720.1 Flavonoid C4H medium borderline
OMERI07G22360.1 Flavonoid C4H low borderline
OMERI08G16730.1 Flavonoid C4H low borderline
OMERI09G05290.1 Flavonoid C4H low borderline
OMERI03G35850.1 Flavonoid CHI medium pass
OMERI06G07530.1 Flavonoid CHI low borderline
OMERI11G01450.1 Flavonoid CHI medium pass
OMERI11G01450.2 Flavonoid CHI medium pass
OMERI11G01450.3 Flavonoid CHI medium pass
OMERI12G00170.1 Flavonoid CHI medium pass
OMERI01G20140.1 Flavonoid CHS medium pass
OMERI02G05250.1 Flavonoid CHS low borderline
OMERI02G05250.2 Flavonoid CHS low borderline
OMERI02G05250.3 Flavonoid CHS low borderline
OMERI02G05250.4 Flavonoid CHS low borderline
OMERI03G02680.2 Flavonoid CHS low borderline
OMERI03G02680.3 Flavonoid CHS low borderline
OMERI03G25420.1 Flavonoid CHS medium pass
OMERI05G06310.1 Flavonoid CHS medium pass
OMERI05G06320.1 Flavonoid CHS medium pass
OMERI05G06330.1 Flavonoid CHS medium pass
OMERI05G06350.1 Flavonoid CHS medium pass
OMERI06G11730.1 Flavonoid CHS low borderline
OMERI07G08300.1 Flavonoid CHS medium pass
OMERI07G13530.1 Flavonoid CHS medium pass
OMERI07G13560.1 Flavonoid CHS medium pass
OMERI10G02470.1 Flavonoid CHS medium pass
OMERI10G02720.1 Flavonoid CHS medium pass