PlantSME Plant secondary metabolism enzyme database

Oryza meridionalis (oryza_meridionalis)

Imported from atlas release summary for Oryza meridionalis.

1703
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 530 18 BAHD (211) View species results
Alkaloid pathway 389 26 7DLGT (56) View species results
Phenylpropanoid pathway 264 13 POD (96) View species results
Flavonoid pathway 238 12 UFGT (147) View species results
Steroid pathway 146 13 SMT1/SMT2/SMT3 (57) View species results
Rosmarinic acid pathway 136 7 C4H (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1757 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 374 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
OMERI02G13260.3 Alkaloid CODM/T6ODM medium borderline
OMERI02G13260.4 Alkaloid CODM/T6ODM medium borderline
OMERI02G14780.3 Alkaloid CODM/T6ODM medium borderline
OMERI02G14780.4 Alkaloid CODM/T6ODM medium borderline
OMERI02G14780.5 Alkaloid CODM/T6ODM medium borderline
OMERI02G15870.1 Alkaloid CODM/T6ODM low borderline
OMERI02G15870.2 Alkaloid CODM/T6ODM low borderline
OMERI02G15870.3 Alkaloid CODM/T6ODM low borderline
OMERI02G15870.4 Alkaloid CODM/T6ODM low borderline
OMERI02G15870.5 Alkaloid CODM/T6ODM low borderline
OMERI02G15870.6 Alkaloid CODM/T6ODM low borderline
OMERI02G15870.7 Alkaloid CODM/T6ODM low borderline
OMERI02G24440.1 Alkaloid CODM/T6ODM medium borderline
OMERI02G32210.1 Alkaloid CODM/T6ODM medium borderline
OMERI02G35580.1 Alkaloid CODM/T6ODM medium borderline
OMERI02G35590.1 Alkaloid CODM/T6ODM medium borderline
OMERI03G01710.1 Alkaloid CODM/T6ODM medium borderline
OMERI03G06740.1 Alkaloid CODM/T6ODM low borderline
OMERI03G12540.1 Alkaloid CODM/T6ODM medium borderline
OMERI03G15510.1 Alkaloid CODM/T6ODM medium borderline
OMERI03G23600.1 Alkaloid CODM/T6ODM medium borderline
OMERI03G26450.1 Alkaloid CODM/T6ODM medium borderline
OMERI03G38280.1 Alkaloid CODM/T6ODM medium borderline
OMERI04G02900.1 Alkaloid CODM/T6ODM medium borderline
OMERI04G02900.2 Alkaloid CODM/T6ODM medium borderline
OMERI04G15900.1 Alkaloid CODM/T6ODM medium borderline
OMERI04G19100.1 Alkaloid CODM/T6ODM medium borderline
OMERI04G19110.1 Alkaloid CODM/T6ODM medium borderline
OMERI04G19110.2 Alkaloid CODM/T6ODM medium borderline
OMERI04G22560.1 Alkaloid CODM/T6ODM medium borderline
OMERI05G02040.1 Alkaloid CODM/T6ODM medium borderline
OMERI05G02050.1 Alkaloid CODM/T6ODM medium borderline
OMERI05G04010.1 Alkaloid CODM/T6ODM medium borderline
OMERI05G06150.1 Alkaloid CODM/T6ODM medium borderline
OMERI05G08150.1 Alkaloid CODM/T6ODM medium pass
OMERI06G04090.1 Alkaloid CODM/T6ODM low borderline
OMERI06G04810.3 Alkaloid CODM/T6ODM medium borderline
OMERI06G06100.1 Alkaloid CODM/T6ODM medium borderline
OMERI06G06100.2 Alkaloid CODM/T6ODM medium borderline
OMERI06G06100.3 Alkaloid CODM/T6ODM medium borderline
OMERI06G06120.1 Alkaloid CODM/T6ODM medium borderline
OMERI06G11410.2 Alkaloid CODM/T6ODM medium borderline
OMERI06G11410.3 Alkaloid CODM/T6ODM medium borderline
OMERI06G19460.1 Alkaloid CODM/T6ODM medium borderline
OMERI07G10700.1 Alkaloid CODM/T6ODM medium borderline
OMERI08G07020.1 Alkaloid CODM/T6ODM low borderline
OMERI08G11540.1 Alkaloid CODM/T6ODM medium borderline
OMERI08G14280.1 Alkaloid CODM/T6ODM medium borderline
OMERI08G17710.1 Alkaloid CODM/T6ODM medium borderline
OMERI08G18440.1 Alkaloid CODM/T6ODM medium borderline