PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2136
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Phal06G0015370.1 Alkaloid CYP80F1 low borderline
Phal07G0018690.1 Alkaloid CYP80F1 medium borderline
Phal01G0008640.1 Alkaloid G8O/G8H medium borderline
Phal01G0010940.1 Alkaloid G8O/G8H medium borderline
Phal01G0026100.1 Alkaloid G8O/G8H medium borderline
Phal02G0003180.1 Alkaloid G8O/G8H medium borderline
Phal02G0003190.1 Alkaloid G8O/G8H medium borderline
Phal02G0009500.1 Alkaloid G8O/G8H medium borderline
Phal02G0017750.1 Alkaloid G8O/G8H medium borderline
Phal02G0020110.1 Alkaloid G8O/G8H medium borderline
Phal02G0032920.1 Alkaloid G8O/G8H medium borderline
Phal02G0036030.1 Alkaloid G8O/G8H medium borderline
Phal03G0016220.1 Alkaloid G8O/G8H medium borderline
Phal03G0016220.2 Alkaloid G8O/G8H medium borderline
Phal03G0026470.1 Alkaloid G8O/G8H medium borderline
Phal03G0040360.1 Alkaloid G8O/G8H medium borderline
Phal03G0040360.2 Alkaloid G8O/G8H medium borderline
Phal03G0040360.3 Alkaloid G8O/G8H medium borderline
Phal03G0040360.4 Alkaloid G8O/G8H medium borderline
Phal03G0040360.5 Alkaloid G8O/G8H medium borderline
Phal03G0040360.6 Alkaloid G8O/G8H medium borderline
Phal03G0040360.7 Alkaloid G8O/G8H medium borderline
Phal03G0040370.1 Alkaloid G8O/G8H medium borderline
Phal03G0040370.2 Alkaloid G8O/G8H medium borderline
Phal03G0040370.3 Alkaloid G8O/G8H medium borderline
Phal03G0040390.1 Alkaloid G8O/G8H medium borderline
Phal04G0004120.1 Alkaloid G8O/G8H medium borderline
Phal04G0010190.1 Alkaloid G8O/G8H medium borderline
Phal04G0010190.2 Alkaloid G8O/G8H medium borderline
Phal04G0010190.3 Alkaloid G8O/G8H medium borderline
Phal04G0010190.4 Alkaloid G8O/G8H medium borderline
Phal04G0010190.5 Alkaloid G8O/G8H medium borderline
Phal04G0010200.1 Alkaloid G8O/G8H medium borderline
Phal04G0010200.3 Alkaloid G8O/G8H medium borderline
Phal04G0010200.4 Alkaloid G8O/G8H medium borderline
Phal05G0046810.1 Alkaloid G8O/G8H low borderline
Phal06G0003290.1 Alkaloid G8O/G8H medium borderline
Phal06G0003300.1 Alkaloid G8O/G8H medium borderline
Phal06G0003310.1 Alkaloid G8O/G8H medium borderline
Phal06G0003660.1 Alkaloid G8O/G8H medium borderline
Phal06G0012660.1 Alkaloid G8O/G8H medium borderline
Phal08G0012550.1 Alkaloid G8O/G8H medium borderline
Phal09G0007740.1 Alkaloid G8O/G8H medium borderline
Phal09G0007790.1 Alkaloid G8O/G8H medium borderline
Phal09G0018500.1 Alkaloid G8O/G8H medium borderline
Phal01G0001620.1 Alkaloid GES medium pass
Phal01G0001620.2 Alkaloid GES medium pass
Phal01G0001620.3 Alkaloid GES medium pass
Phal01G0001620.4 Alkaloid GES medium pass
Phal01G0001630.1 Alkaloid GES medium pass