Penium margaritaceum (penium_margaritaceum)
Imported from atlas release summary for Penium margaritaceum.
642
Candidate Genes
96
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
642
Candidate Genes
CSE
6.91%
BAHD
6.69%
POD
6.63%
4CL
5.9%
C4H
4.89%
C3'H/CYP98A
4.67%
NMT
3.99%
STR
3.2%
Other Families
57.11%
More Families (88)
IFR
49
2.75%
DWF4/CYP90B1
48
2.7%
IFS
45
2.53%
CYP76
43
2.42%
SLS
37
2.08%
CYP71
37
2.08%
BR6OX2/CYP85A2
35
1.97%
T3O
27
1.52%
F3'H/CYP75B
27
1.52%
TRI/TRII
25
1.41%
CYP719
24
1.35%
GS
24
1.35%
CAS
24
1.35%
PYKS
23
1.29%
SMT1/SMT2/SMT3
23
1.29%
COR
22
1.24%
CNMT
20
1.12%
CPD/CYP90A1
18
1.01%
ANR
17
0.96%
LAC
17
0.96%
SGD
16
0.9%
FNS
16
0.9%
SQS/FDFT1
16
0.9%
G8O/G8H
15
0.84%
ODC
14
0.79%
CPR
13
0.73%
FPPS
13
0.73%
AACT
13
0.73%
F3'5'H/CYP75A
12
0.67%
CHS
11
0.62%
CAD
11
0.62%
MVK
11
0.62%
NCS
10
0.56%
TAT
10
0.56%
HPPR
9
0.51%
7DLH
8
0.45%
F3H
8
0.45%
CCR
8
0.45%
SMO1/SMO2
8
0.45%
DET2
8
0.45%
HDS/IspG
8
0.45%
HMGR
8
0.45%
H6H
7
0.39%
DXR
7
0.39%
PMT
6
0.34%
CYP90D1
6
0.34%
SQE
6
0.34%
HYD1
6
0.34%
HMGS
6
0.34%
DXS
6
0.34%
CYP80B1
5
0.28%
GES
5
0.28%
TYDC_DDC
5
0.28%
PAL
5
0.28%
COMT
5
0.28%
DWF1
5
0.28%
CPI1
5
0.28%
IDI
5
0.28%
MVD
5
0.28%
UGT
5
0.28%
PMK
5
0.28%
TDC
4
0.22%
T16H
4
0.22%
MPO
4
0.22%
8HGO
4
0.22%
RAS
4
0.22%
CYP51G1
4
0.22%
FK
4
0.22%
HDR/IspH
4
0.22%
MCT/IspD
4
0.22%
GGPPS
4
0.22%
MDS/IspF
4
0.22%
GPPS
4
0.22%
ADC
3
0.17%
DWF5
3
0.17%
DWF7
3
0.17%
IO
2
0.11%
16OMT
2
0.11%
BBE
2
0.11%
6OMT_4OMT_SOMT
2
0.11%
CODM/T6ODM
2
0.11%
UFGT
2
0.11%
DFR
2
0.11%
F5H/CYP84A
2
0.11%
HCT
2
0.11%
BR6OX1/CYP85A1
2
0.11%
CMK/IspE
2
0.11%
TPS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 186 | 7 | POD (100) | View species results |
| Terpenoid pathway | 155 | 20 | BAHD (69) | View species results |
| Alkaloid pathway | 146 | 12 | NMT (37) | View species results |
| Steroid pathway | 85 | 12 | CAS (19) | View species results |
| Rosmarinic acid pathway | 40 | 5 | 4CL (19) | View species results |
| Flavonoid pathway | 30 | 4 | 4CL (19) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 22 | 571 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 125 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| PmarPM0001770007670.1 | Alkaloid | STR | low | borderline |
| PmarPM0004780018150.1 | Alkaloid | STR | low | borderline |
| PmarPM0005150019950.1 | Alkaloid | STR | low | borderline |
| PmarPM0005910023330.1 | Alkaloid | STR | medium | pass |
| PmarPM0005910023390.1 | Alkaloid | STR | low | borderline |
| PmarPM0007850031170.1 | Alkaloid | STR | low | borderline |
| PmarPM0009820040130.1 | Alkaloid | STR | low | borderline |
| PmarPM0011480046640.1 | Alkaloid | STR | medium | pass |
| PmarPM0011480046650.1 | Alkaloid | STR | medium | pass |
| PmarPM0011950048760.1 | Alkaloid | STR | low | borderline |
| PmarPM0015930062720.1 | Alkaloid | STR | low | borderline |
| PmarPM0021510081180.1 | Alkaloid | STR | low | borderline |
| PmarPM0029140104200.1 | Alkaloid | STR | medium | pass |
| PmarPM0029260104670.1 | Alkaloid | STR | low | borderline |
| PmarPM0029260104720.1 | Alkaloid | STR | low | borderline |
| PmarPM0031920112120.1 | Alkaloid | STR | low | borderline |
| PmarPM0032450113590.1 | Alkaloid | STR | low | borderline |
| PmarPM0034110118090.1 | Alkaloid | STR | low | borderline |
| PmarPM0043530142600.1 | Alkaloid | STR | low | borderline |
| PmarPM0043840143180.1 | Alkaloid | STR | medium | pass |
| PmarPM0044980146070.1 | Alkaloid | STR | medium | pass |
| PmarPM0047590152960.1 | Alkaloid | STR | low | borderline |
| PmarPM0049620157770.1 | Alkaloid | STR | low | borderline |
| PmarPM0056850174240.1 | Alkaloid | STR | low | borderline |
| PmarPM0065960193150.1 | Alkaloid | STR | low | borderline |
| PmarPM0066350194110.1 | Alkaloid | STR | low | borderline |
| PmarPM0070800202330.1 | Alkaloid | STR | low | borderline |
| PmarPM0071580203750.1 | Alkaloid | STR | medium | pass |
| PmarPM0074200208870.1 | Alkaloid | STR | low | borderline |
| PmarPM0074240209020.1 | Alkaloid | STR | medium | pass |
| PmarPM0084350227150.1 | Alkaloid | STR | medium | pass |
| PmarPM0085740229650.1 | Alkaloid | STR | medium | pass |
| PmarPM0109460267610.1 | Alkaloid | STR | medium | pass |
| PmarPM0114820275820.1 | Alkaloid | STR | low | borderline |
| PmarPM0120120282770.1 | Alkaloid | STR | medium | pass |
| PmarPM0135210301870.1 | Alkaloid | STR | low | borderline |
| PmarPM0137140304300.1 | Alkaloid | STR | medium | pass |
| PmarPM0147380316640.1 | Alkaloid | STR | low | borderline |
| PmarPM0157780328180.1 | Alkaloid | STR | medium | pass |
| PmarPM0157780328200.1 | Alkaloid | STR | low | borderline |
| PmarPM0174410345380.1 | Alkaloid | STR | medium | pass |
| PmarPM0199980367560.1 | Alkaloid | STR | low | borderline |
| PmarPM0200800368230.1 | Alkaloid | STR | low | borderline |
| PmarPM0213080377730.1 | Alkaloid | STR | medium | pass |
| PmarPM0266950411090.1 | Alkaloid | STR | medium | pass |
| PmarPM0271570413540.1 | Alkaloid | STR | low | borderline |
| PmarPM0316590432210.1 | Alkaloid | STR | low | borderline |
| PmarPM0338970439190.1 | Alkaloid | STR | medium | pass |
| PmarPM0338970439200.1 | Alkaloid | STR | medium | pass |
| PmarPM0343060440290.1 | Alkaloid | STR | medium | pass |