Penium margaritaceum (penium_margaritaceum)
Imported from atlas release summary for Penium margaritaceum.
1238
Candidate Protein Records
642
Pathway-Level Records
1779
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1779
Family-Level Calls
CSE
6.91%
BAHD
6.69%
POD
6.63%
4CL
5.9%
C4H
4.89%
C3'H/CYP98A
4.67%
NMT
3.99%
STR
3.2%
Other Families
57.11%
More Families (88)
IFR
49
2.75%
DWF4/CYP90B1
48
2.7%
IFS
45
2.53%
CYP76
43
2.42%
SLS
37
2.08%
CYP71
37
2.08%
BR6OX2/CYP85A2
35
1.97%
T3O
27
1.52%
F3'H/CYP75B
27
1.52%
TRI/TRII
25
1.41%
CYP719
24
1.35%
GS
24
1.35%
CAS
24
1.35%
PYKS
23
1.29%
SMT1/SMT2/SMT3
23
1.29%
COR
22
1.24%
CNMT
20
1.12%
CPD/CYP90A1
18
1.01%
ANR
17
0.96%
LAC
17
0.96%
SGD
16
0.9%
FNS
16
0.9%
SQS/FDFT1
16
0.9%
G8O/G8H
15
0.84%
ODC
14
0.79%
CPR
13
0.73%
FPPS
13
0.73%
AACT
13
0.73%
F3'5'H/CYP75A
12
0.67%
CHS
11
0.62%
CAD
11
0.62%
MVK
11
0.62%
NCS
10
0.56%
TAT
10
0.56%
HPPR
9
0.51%
7DLH
8
0.45%
F3H
8
0.45%
CCR
8
0.45%
SMO1/SMO2
8
0.45%
DET2
8
0.45%
HDS/IspG
8
0.45%
HMGR
8
0.45%
H6H
7
0.39%
DXR
7
0.39%
PMT
6
0.34%
CYP90D1
6
0.34%
SQE
6
0.34%
HYD1
6
0.34%
HMGS
6
0.34%
DXS
6
0.34%
CYP80B1
5
0.28%
GES
5
0.28%
TYDC_DDC
5
0.28%
PAL
5
0.28%
COMT
5
0.28%
DWF1
5
0.28%
CPI1
5
0.28%
IDI
5
0.28%
MVD
5
0.28%
UGT
5
0.28%
PMK
5
0.28%
TDC
4
0.22%
T16H
4
0.22%
MPO
4
0.22%
8HGO
4
0.22%
RAS
4
0.22%
CYP51G1
4
0.22%
FK
4
0.22%
HDR/IspH
4
0.22%
MCT/IspD
4
0.22%
GGPPS
4
0.22%
MDS/IspF
4
0.22%
GPPS
4
0.22%
ADC
3
0.17%
DWF5
3
0.17%
DWF7
3
0.17%
IO
2
0.11%
16OMT
2
0.11%
BBE
2
0.11%
6OMT_4OMT_SOMT
2
0.11%
CODM/T6ODM
2
0.11%
UFGT
2
0.11%
DFR
2
0.11%
F5H/CYP84A
2
0.11%
HCT
2
0.11%
BR6OX1/CYP85A1
2
0.11%
CMK/IspE
2
0.11%
TPS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 186 | 7 | POD (100) | View species results |
| Terpenoid pathway | 155 | 20 | BAHD (69) | View species results |
| Alkaloid pathway | 146 | 12 | NMT (37) | View species results |
| Steroid pathway | 85 | 12 | CAS (19) | View species results |
| Rosmarinic acid pathway | 40 | 5 | 4CL (19) | View species results |
| Flavonoid pathway | 30 | 4 | 4CL (19) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 22 | 571 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 125 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| PmarPM0043290141900.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0049400157060.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0055640171840.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0057210175060.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0068570198210.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0069140199420.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0069140199430.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0090560238570.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0116440278010.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0119360281840.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0122020285060.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0123320286940.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0130640296380.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0163580334640.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0169160340180.1 | Alkaloid | SLS | low | borderline |
| PmarPM0179910350060.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0196020364090.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0212420377400.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0212910377610.1 | Alkaloid | SLS | low | borderline |
| PmarPM0218940381810.1 | Alkaloid | SLS | low | borderline |
| PmarPM0221760383880.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0230310389670.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0266690410880.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0323660434510.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0333690437760.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0787870482520.1 | Alkaloid | SLS | medium | borderline |
| PmarPM1883980509160.1 | Alkaloid | SLS | medium | borderline |
| PmarPM2435660515750.1 | Alkaloid | SLS | medium | borderline |
| PmarPM0001770007670.1 | Alkaloid | STR | low | borderline |
| PmarPM0004780018150.1 | Alkaloid | STR | low | borderline |
| PmarPM0005150019950.1 | Alkaloid | STR | low | borderline |
| PmarPM0005910023330.1 | Alkaloid | STR | medium | pass |
| PmarPM0005910023390.1 | Alkaloid | STR | low | borderline |
| PmarPM0007850031170.1 | Alkaloid | STR | low | borderline |
| PmarPM0009820040130.1 | Alkaloid | STR | low | borderline |
| PmarPM0011480046640.1 | Alkaloid | STR | medium | pass |
| PmarPM0011480046650.1 | Alkaloid | STR | medium | pass |
| PmarPM0011950048760.1 | Alkaloid | STR | low | borderline |
| PmarPM0015930062720.1 | Alkaloid | STR | low | borderline |
| PmarPM0021510081180.1 | Alkaloid | STR | low | borderline |
| PmarPM0029140104200.1 | Alkaloid | STR | medium | pass |
| PmarPM0029260104670.1 | Alkaloid | STR | low | borderline |
| PmarPM0029260104720.1 | Alkaloid | STR | low | borderline |
| PmarPM0031920112120.1 | Alkaloid | STR | low | borderline |
| PmarPM0032450113590.1 | Alkaloid | STR | low | borderline |
| PmarPM0034110118090.1 | Alkaloid | STR | low | borderline |
| PmarPM0043530142600.1 | Alkaloid | STR | low | borderline |
| PmarPM0043840143180.1 | Alkaloid | STR | medium | pass |
| PmarPM0044980146070.1 | Alkaloid | STR | medium | pass |
| PmarPM0047590152960.1 | Alkaloid | STR | low | borderline |