PlantSME Plant secondary metabolism enzyme database

Phtheirospermum japonicum (phtheirospermum_japonicum)

Imported from atlas release summary for Phtheirospermum japonicum.

1515
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 441 20 BAHD (159) View species results
Alkaloid pathway 328 22 7DLGT (64) View species results
Phenylpropanoid pathway 315 11 POD (132) View species results
Flavonoid pathway 208 13 UFGT (134) View species results
Rosmarinic acid pathway 128 7 C4H (39) View species results
Steroid pathway 95 14 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
PjapPjv1Scaffold_11990028100.1 Flavonoid PAL high pass
PjapPjv1Scaffold_2080093580.1 Flavonoid PAL low borderline
PjapPjv1Scaffold_2240102140.1 Flavonoid PAL high pass
PjapPjv1Scaffold_23450106380.1 Flavonoid PAL medium pass
PjapPjv1Scaffold_2800127040.1 Flavonoid PAL medium pass
PjapPjv1Scaffold_3530154690.1 Flavonoid PAL low borderline
PjapPjv1Scaffold_5340207780.1 Flavonoid PAL medium pass
PjapPjv1Scaffold_570218670.1 Flavonoid PAL high pass
PjapPjv1Scaffold_6010228210.1 Flavonoid PAL low borderline
PjapPjv1Scaffold_6040228690.1 Flavonoid PAL low borderline
PjapPjv1Scaffold_6450240120.1 Flavonoid PAL high pass
PjapPjv1Scaffold_710253140.1 Flavonoid PAL medium pass
PjapPjv1Scaffold_7840268570.1 Flavonoid PAL medium pass
PjapPjv1Scaffold_7840268580.1 Flavonoid PAL low borderline
PjapPjv1Scaffold_11990028100.1 Phenylpropanoid PAL high pass
PjapPjv1Scaffold_2080093580.1 Phenylpropanoid PAL low borderline
PjapPjv1Scaffold_2240102140.1 Phenylpropanoid PAL high pass
PjapPjv1Scaffold_23450106380.1 Phenylpropanoid PAL medium pass
PjapPjv1Scaffold_2800127040.1 Phenylpropanoid PAL medium pass
PjapPjv1Scaffold_3530154690.1 Phenylpropanoid PAL low borderline
PjapPjv1Scaffold_5340207780.1 Phenylpropanoid PAL medium pass
PjapPjv1Scaffold_570218670.1 Phenylpropanoid PAL high pass
PjapPjv1Scaffold_6010228210.1 Phenylpropanoid PAL low borderline
PjapPjv1Scaffold_6040228690.1 Phenylpropanoid PAL low borderline
PjapPjv1Scaffold_6450240120.1 Phenylpropanoid PAL high pass
PjapPjv1Scaffold_710253140.1 Phenylpropanoid PAL medium pass
PjapPjv1Scaffold_7840268570.1 Phenylpropanoid PAL medium pass
PjapPjv1Scaffold_7840268580.1 Phenylpropanoid PAL low borderline
PjapPjv1Scaffold_11990028100.1 Rosmarinic Acid PAL high pass
PjapPjv1Scaffold_2080093580.1 Rosmarinic Acid PAL low borderline
PjapPjv1Scaffold_2240102140.1 Rosmarinic Acid PAL high pass
PjapPjv1Scaffold_23450106380.1 Rosmarinic Acid PAL medium pass
PjapPjv1Scaffold_2800127040.1 Rosmarinic Acid PAL medium pass
PjapPjv1Scaffold_3530154690.1 Rosmarinic Acid PAL low borderline
PjapPjv1Scaffold_5340207780.1 Rosmarinic Acid PAL medium pass
PjapPjv1Scaffold_570218670.1 Rosmarinic Acid PAL high pass
PjapPjv1Scaffold_6010228210.1 Rosmarinic Acid PAL low borderline
PjapPjv1Scaffold_6040228690.1 Rosmarinic Acid PAL low borderline
PjapPjv1Scaffold_6450240120.1 Rosmarinic Acid PAL high pass
PjapPjv1Scaffold_710253140.1 Rosmarinic Acid PAL medium pass
PjapPjv1Scaffold_7840268570.1 Rosmarinic Acid PAL medium pass
PjapPjv1Scaffold_7840268580.1 Rosmarinic Acid PAL low borderline