PlantSME Plant secondary metabolism enzyme database

Phtheirospermum japonicum (phtheirospermum_japonicum)

Imported from atlas release summary for Phtheirospermum japonicum.

1515
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 441 20 BAHD (159) View species results
Alkaloid pathway 328 22 7DLGT (64) View species results
Phenylpropanoid pathway 315 11 POD (132) View species results
Flavonoid pathway 208 13 UFGT (134) View species results
Rosmarinic acid pathway 128 7 C4H (39) View species results
Steroid pathway 95 14 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
PjapPjv1Scaffold_12110031000.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_1220031470.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_13290043880.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_14720056290.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_1580064510.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_1670070100.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_1770078200.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_1860082420.1 Alkaloid T16H low borderline
PjapPjv1Scaffold_190083720.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_190083750.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_2010090790.1 Alkaloid T16H medium pass
PjapPjv1Scaffold_2970132570.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_30133760.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_3220143220.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_3220143260.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_3280144980.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_3370149170.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_3370149190.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_370160610.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_4080173720.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_4080173760.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_4080173780.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_4370180640.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_4370180660.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_4370180680.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_4370180700.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_570218140.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_5780220990.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_620232380.1 Alkaloid T16H medium pass
PjapPjv1Scaffold_620232410.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_620232420.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_6240233480.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_6430239200.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_6590243260.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_880283240.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_88190283960.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_92860291960.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_9310292540.1 Alkaloid T16H medium borderline
PjapPjv1Scaffold_940293770.1 Alkaloid T16H low borderline
PjapPjv1Scaffold_9440294420.1 Alkaloid T16H medium borderline