PlantSME Plant secondary metabolism enzyme database

Phyllostachys edulis (phyllostachys_edulis)

Imported from atlas release summary for Phyllostachys edulis.

2885
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 820 19 BAHD (285) View species results
Phenylpropanoid pathway 648 12 POD (312) View species results
Alkaloid pathway 618 25 7DLGT (122) View species results
Flavonoid pathway 358 13 UFGT (234) View species results
Rosmarinic acid pathway 256 7 C4H (126) View species results
Steroid pathway 185 11 CAS (81) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 527 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
Reset
Gene Pathway Family Confidence Status
Peduhic_scaffold_100008760.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_100014510.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_100021820.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_110027350.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_130075920.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_140104800.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_140114400.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_140114420.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_140116100.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_150132650.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_150153690.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_160164320.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_160183400.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_160186240.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_170203720.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_170208120.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_170208190.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_180223500.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_190241470.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_200254180.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_200254770.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_20249340.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_20250170.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_210267330.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_210267370.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_210278770.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_210280530.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_210283980.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_210289260.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_220302960.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_220312300.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_230320090.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_240347990.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_240353440.1 Steroid CYP90D1 medium borderline
Peduhic_scaffold_40393380.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_40394930.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_48490411350.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_50411660.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_50411790.1 Steroid CYP90D1 low borderline
Peduhic_scaffold_60441770.1 Steroid CYP90D1 low borderline