PlantSME Plant secondary metabolism enzyme database

Phyllostachys edulis (phyllostachys_edulis)

Imported from atlas release summary for Phyllostachys edulis.

2885
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 820 19 BAHD (285) View species results
Phenylpropanoid pathway 648 12 POD (312) View species results
Alkaloid pathway 618 25 7DLGT (122) View species results
Flavonoid pathway 358 13 UFGT (234) View species results
Rosmarinic acid pathway 256 7 C4H (126) View species results
Steroid pathway 185 11 CAS (81) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 527 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Peduhic_scaffold_10005660.1 Alkaloid GS medium pass
Peduhic_scaffold_130070180.1 Alkaloid GS low borderline
Peduhic_scaffold_130073200.1 Alkaloid GS medium pass
Peduhic_scaffold_130084210.1 Alkaloid GS low borderline
Peduhic_scaffold_170204700.1 Alkaloid GS low borderline
Peduhic_scaffold_170213740.1 Alkaloid GS high pass
Peduhic_scaffold_180231070.1 Alkaloid GS low borderline
Peduhic_scaffold_180235640.1 Alkaloid GS high pass
Peduhic_scaffold_180235650.1 Alkaloid GS high pass
Peduhic_scaffold_180235660.1 Alkaloid GS high pass
Peduhic_scaffold_200260680.1 Alkaloid GS high pass
Peduhic_scaffold_200260690.1 Alkaloid GS high pass
Peduhic_scaffold_210290850.1 Alkaloid GS high pass
Peduhic_scaffold_220298970.1 Alkaloid GS medium pass
Peduhic_scaffold_220308190.1 Alkaloid GS high pass
Peduhic_scaffold_220308200.1 Alkaloid GS medium pass
Peduhic_scaffold_220308370.1 Alkaloid GS high pass
Peduhic_scaffold_220308380.1 Alkaloid GS high pass
Peduhic_scaffold_220308390.1 Alkaloid GS high pass
Peduhic_scaffold_220312100.1 Alkaloid GS medium pass
Peduhic_scaffold_230317990.1 Alkaloid GS high pass
Peduhic_scaffold_230330860.1 Alkaloid GS low borderline
Peduhic_scaffold_230333350.1 Alkaloid GS high pass
Peduhic_scaffold_230333360.1 Alkaloid GS medium pass
Peduhic_scaffold_230333380.1 Alkaloid GS high pass
Peduhic_scaffold_240342260.1 Alkaloid GS low borderline
Peduhic_scaffold_240342270.1 Alkaloid GS low borderline
Peduhic_scaffold_240342530.1 Alkaloid GS low borderline
Peduhic_scaffold_240355710.1 Alkaloid GS high pass
Peduhic_scaffold_30366110.1 Alkaloid GS low borderline
Peduhic_scaffold_30388640.1 Alkaloid GS low borderline
Peduhic_scaffold_30388650.1 Alkaloid GS low borderline
Peduhic_scaffold_50415520.1 Alkaloid GS high pass
Peduhic_scaffold_50415540.1 Alkaloid GS high pass
Peduhic_scaffold_50415550.1 Alkaloid GS high pass
Peduhic_scaffold_70450610.1 Alkaloid GS medium pass
Peduhic_scaffold_70450970.1 Alkaloid GS low borderline
Peduhic_scaffold_70451280.1 Alkaloid GS low borderline
Peduhic_scaffold_80484150.1 Alkaloid GS low borderline
Peduhic_scaffold_90497170.1 Alkaloid GS low borderline