PlantSME Plant secondary metabolism enzyme database

Phyllostachys edulis (phyllostachys_edulis)

Imported from atlas release summary for Phyllostachys edulis.

2885
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 820 19 BAHD (285) View species results
Phenylpropanoid pathway 648 12 POD (312) View species results
Alkaloid pathway 618 25 7DLGT (122) View species results
Flavonoid pathway 358 13 UFGT (234) View species results
Rosmarinic acid pathway 256 7 C4H (126) View species results
Steroid pathway 185 11 CAS (81) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 527 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
Peduhic_scaffold_120038110.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_120039870.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_130053450.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_130058790.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_130084080.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_140116510.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_150122480.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_150127670.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_170201620.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_170209930.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_20252200.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_230314850.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_230316560.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_230318950.1 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
Peduhic_scaffold_230333260.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_240353880.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_240354480.1 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
Peduhic_scaffold_240354520.1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Peduhic_scaffold_240358600.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_30368520.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_30380520.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_50424180.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_60432880.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_60432890.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_80473540.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Peduhic_scaffold_80481900.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA