PlantSME Plant secondary metabolism enzyme database

Phyllostachys edulis (phyllostachys_edulis)

Imported from atlas release summary for Phyllostachys edulis.

2885
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 820 19 BAHD (285) View species results
Phenylpropanoid pathway 648 12 POD (312) View species results
Alkaloid pathway 618 25 7DLGT (122) View species results
Flavonoid pathway 358 13 UFGT (234) View species results
Rosmarinic acid pathway 256 7 C4H (126) View species results
Steroid pathway 185 11 CAS (81) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 527 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Peduhic_scaffold_240341640.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_240344020.1 Rosmarinic Acid 4CL low borderline
Peduhic_scaffold_240349960.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_240354540.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_240359100.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_240359640.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_30363230.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_30372720.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_30382900.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_60432280.1 Rosmarinic Acid 4CL low borderline
Peduhic_scaffold_60440100.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_60441170.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_60446810.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_70456480.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_70463800.1 Rosmarinic Acid 4CL low borderline
Peduhic_scaffold_80485740.1 Rosmarinic Acid 4CL medium pass
Peduhic_scaffold_90492390.1 Rosmarinic Acid 4CL low borderline
Peduhic_scaffold_100008760.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_100008840.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_100010990.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_100015010.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_100017600.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_100019960.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_100021820.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_100021830.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_100021840.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_100021870.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_100023470.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_100024260.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_10004870.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_10006920.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_110026490.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_110027350.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_110030290.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_110034370.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_110034380.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_120043110.1 Rosmarinic Acid C4H medium pass
Peduhic_scaffold_120047500.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_120047970.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130057300.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130060440.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130060550.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130061800.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130063640.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130067170.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130068600.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130072590.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130072600.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130073380.1 Rosmarinic Acid C4H low borderline
Peduhic_scaffold_130073430.1 Rosmarinic Acid C4H medium pass