PlantSME Plant secondary metabolism enzyme database

Plagiomnium ciliare (plagiomnium_ciliare)

Imported from atlas release summary for Plagiomnium ciliare.

775
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 216 19 BAHD (73) View species results
Phenylpropanoid pathway 177 11 POD (83) View species results
Alkaloid pathway 162 21 7DLGT (34) View species results
Flavonoid pathway 109 9 UFGT (51) View species results
Rosmarinic acid pathway 71 7 C4H (30) View species results
Steroid pathway 40 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 729 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 155 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
Pcil3140260307190 Phenylpropanoid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcil3140260307200 Phenylpropanoid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
Pcil3247100313540 Phenylpropanoid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pcil3247110313560 Phenylpropanoid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pcil4790334150 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcil4840334650 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcil5100336690 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pcil960341880 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcil2854510037290 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pcil2931780044370 Rosmarinic Acid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcil2937000046310 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pcil2999850058410 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pcil3006710059430 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pcil3008870060790 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pcil3058240086480 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcil3060860088640 Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pcil3093050143520 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pcil3093250144170 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcil3097180155760 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pcil3097520156770 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcil3106170184950 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcil3108740192570 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pcil3118320231850 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pcil3120560240790 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcil3120850242170 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcil3128000273310 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pcil3131270288470 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pcil3140250307170 Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcil3140250307180 Rosmarinic Acid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
Pcil3140260307190 Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pcil3140260307200 Rosmarinic Acid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
Pcil3247100313540 Rosmarinic Acid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pcil3247110313560 Rosmarinic Acid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pcil4790334150 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pcil4840334650 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pcil5100336690 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pcil960341880 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH