PlantSME Plant secondary metabolism enzyme database

Plagiomnium ciliare (plagiomnium_ciliare)

Imported from atlas release summary for Plagiomnium ciliare.

775
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 216 19 BAHD (73) View species results
Phenylpropanoid pathway 177 11 POD (83) View species results
Alkaloid pathway 162 21 7DLGT (34) View species results
Flavonoid pathway 109 9 UFGT (51) View species results
Rosmarinic acid pathway 71 7 C4H (30) View species results
Steroid pathway 40 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 729 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 155 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pcil1700005270 Flavonoid F3H medium borderline
Pcil2520017310 Flavonoid F3H low borderline
Pcil2668830022570 Flavonoid F3H medium borderline
Pcil2681700025030 Flavonoid F3H low borderline
Pcil2728500030520 Flavonoid F3H medium pass
Pcil2933180045280 Flavonoid F3H low borderline
Pcil2933460045560 Flavonoid F3H medium borderline
Pcil3038530070630 Flavonoid F3H medium borderline
Pcil3041220073110 Flavonoid F3H low borderline
Pcil3068270098860 Flavonoid F3H low borderline
Pcil3084690125160 Flavonoid F3H low borderline
Pcil3084990125380 Flavonoid F3H medium borderline
Pcil3086790129260 Flavonoid F3H medium borderline
Pcil3089350135350 Flavonoid F3H medium borderline
Pcil3090640138200 Flavonoid F3H medium borderline
Pcil3090810138520 Flavonoid F3H low borderline
Pcil3094040146100 Flavonoid F3H medium pass
Pcil3099700163660 Flavonoid F3H medium borderline
Pcil3104960181050 Flavonoid F3H medium borderline
Pcil3108540191790 Flavonoid F3H medium borderline
Pcil3110540198330 Flavonoid F3H medium borderline
Pcil3112490205230 Flavonoid F3H medium pass
Pcil3114160212640 Flavonoid F3H medium pass
Pcil3114160212650 Flavonoid F3H medium pass
Pcil3114160212710 Flavonoid F3H medium pass
Pcil3114990215330 Flavonoid F3H medium borderline
Pcil3115560217860 Flavonoid F3H low borderline
Pcil3115570217910 Flavonoid F3H medium borderline
Pcil3117500227360 Flavonoid F3H medium borderline
Pcil3118530232860 Flavonoid F3H medium borderline
Pcil3118530232870 Flavonoid F3H medium borderline
Pcil3120170238840 Flavonoid F3H medium borderline
Pcil3120170238860 Flavonoid F3H medium borderline
Pcil3120810241980 Flavonoid F3H medium borderline
Pcil3121820246650 Flavonoid F3H medium borderline
Pcil3123320253060 Flavonoid F3H low borderline
Pcil3124310257900 Flavonoid F3H medium borderline
Pcil3127980273220 Flavonoid F3H medium borderline
Pcil3133910298640 Flavonoid F3H medium pass
Pcil3560323460 Flavonoid F3H medium borderline
Pcil3650324680 Flavonoid F3H medium pass
Pcil4510331140 Flavonoid F3H medium borderline
Pcil5420338140 Flavonoid F3H medium borderline
Pcil6030340210 Flavonoid F3H medium borderline