Plagiomnium ciliare (plagiomnium_ciliare)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 27.87% Phenylpropanoid pathway 22.84% Alkaloid pathway 20.9% Flavonoid pathway 14.06% Rosmarinic acid pathway 9.16% Steroid pathway 5.16%

Family Distribution

775 Candidate Genes

C4H 6.56% BAHD 6.1% C3'H/CYP98A 5.85% CYP76 4.82% POD 4.51% 4CL 4.46% NMT 3.69% UGT 2.97%

Other Families 61.03%

More Families (96)

IFS 57 2.92% UFGT 56 2.87% 7DLGT 55 2.82% STR 47 2.41% F3H 44 2.26% BR6OX2/CYP85A2 42 2.15% F3'H/CYP75B 38 1.95% DWF4/CYP90B1 38 1.95% T3O 37 1.9% PAL 36 1.85% IFR 35 1.79% GS 33 1.69% IO 31 1.59% PYKS 30 1.54% CODM/T6ODM 24 1.23% T16H 23 1.18% CAD 23 1.18% SMT1/SMT2/SMT3 23 1.18% HCT 22 1.13% CHS 21 1.08% H6H 19 0.97% F3'5'H/CYP75A 19 0.97% CYP71 19 0.97% G8O/G8H 16 0.82% TRI/TRII 15 0.77% COMT 15 0.77% 8HGO 14 0.72% ANR 14 0.72% RAS 14 0.72% SLS 13 0.67% CAS 13 0.67% CNMT 12 0.62% NCS 11 0.56% FNS 11 0.56% CSE 11 0.56% LAC 11 0.56% 7DLH 10 0.51% TAT 10 0.51% CPD/CYP90A1 10 0.51% CYP90D1 10 0.51% SGD 9 0.46% MPO 9 0.46% 16OMT 9 0.46% LAMT 8 0.41% PMT 8 0.41% BR6OX1/CYP85A1 8 0.41% DXS 7 0.36% GGPPS 7 0.36% BBE 6 0.31% CYP80B1 6 0.31% CCR 6 0.31% CPI1 6 0.31% TPS 6 0.31% COR 5 0.26% CYP80F1 5 0.26% CPR 5 0.26% DET2 5 0.26% AACT 5 0.26% GES 4 0.21% TDC 4 0.21% DFR 4 0.21% SQS/FDFT1 4 0.21% DXR 4 0.21% FPPS 4 0.21% CYP719 3 0.15% 6OMT_4OMT_SOMT 3 0.15% TYDC_DDC 3 0.15% F5H/CYP84A 3 0.15% ROT3/CYP90C1 3 0.15% SQE 3 0.15% DWF5 3 0.15% MVD 3 0.15% MVK 3 0.15% HDS/IspG 3 0.15% ADC 2 0.1% CHI 2 0.1% FLS 2 0.1% CCoAOMT 2 0.1% CYP51G1 2 0.1% SMO1/SMO2 2 0.1% DWF1 2 0.1% HYD1 2 0.1% HMGS 2 0.1% IDI 2 0.1% MCT/IspD 2 0.1% HMGR 2 0.1% ISY 1 0.05% ANS/LDOX 1 0.05% HPPR 1 0.05% DWF7 1 0.05% FK 1 0.05% HDR/IspH 1 0.05% CMK/IspE 1 0.05% MDS/IspF 1 0.05% GPPS 1 0.05% PMK 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	216	19	BAHD (73)	View species results
Phenylpropanoid pathway	177	11	POD (83)	View species results
Alkaloid pathway	162	21	7DLGT (34)	View species results
Flavonoid pathway	109	9	UFGT (51)	View species results
Rosmarinic acid pathway	71	7	C4H (30)	View species results
Steroid pathway	40	13	CAS (13)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	729	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	155	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Pcil3101110168750	Terpenoid	BAHD	low	borderline	BAHD__00044__sp_Q56WD9_THIK2_ARATH
Pcil3101680171400	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Pcil3102800173940	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pcil3103350175530	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Pcil3103860176970	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Pcil3104570179780	Terpenoid	BAHD	medium	pass	BAHD__00053__sp_Q8GXU8_LPAT1_ARATH
Pcil3105860184170	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Pcil3106930187120	Terpenoid	BAHD	low	borderline	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Pcil3108320190990	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Pcil3108390191270	Terpenoid	BAHD	medium	pass	BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Pcil3108510191690	Terpenoid	BAHD	low	borderline	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Pcil3110050197650	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Pcil3111400200800	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Pcil3111400200840	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Pcil3112830206360	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pcil3112930206840	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pcil3113140207980	Terpenoid	BAHD	medium	pass	BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Pcil3113380208920	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Pcil3113380208960	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Pcil3113910211550	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pcil3114100212370	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Pcil3115180216020	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Pcil3115480217230	Terpenoid	BAHD	medium	pass	BAHD__00034__sp_P10349_GPAT2_CUCMO
Pcil3115800218870	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pcil3116410222230	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Pcil3116530222720	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Pcil3116780224150	Terpenoid	BAHD	low	borderline	BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Pcil3117690228440	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Pcil3118370232070	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Pcil3118770233940	Terpenoid	BAHD	low	borderline	BAHD__00012__sp_A1XWY7_CFAT_PETHY
Pcil3119810237410	Terpenoid	BAHD	medium	pass	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Pcil3120700241300	Terpenoid	BAHD	medium	pass	BAHD__00053__sp_Q8GXU8_LPAT1_ARATH
Pcil3120700241310	Terpenoid	BAHD	low	borderline	BAHD__00053__sp_Q8GXU8_LPAT1_ARATH
Pcil3121430244860	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Pcil3122760251000	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Pcil3123030251820	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Pcil3123790254790	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
Pcil3123790254810	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
Pcil3124970261000	Terpenoid	BAHD	medium	pass	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Pcil3128590275560	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Pcil3128770276330	Terpenoid	BAHD	low	borderline	BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Pcil3129780281350	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pcil3129970282080	Terpenoid	BAHD	medium	pass	BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Pcil3130500284840	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Pcil3130500284850	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Pcil3132710294360	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Pcil3133750297850	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Pcil3134250299610	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pcil3134350299860	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Pcil3134650300910	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH