Plagiomnium ciliare (plagiomnium_ciliare)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 27.87% Phenylpropanoid pathway 22.84% Alkaloid pathway 20.9% Flavonoid pathway 14.06% Rosmarinic acid pathway 9.16% Steroid pathway 5.16%

Family Distribution

1950 Family-Level Calls

C4H 6.56% BAHD 6.1% C3'H/CYP98A 5.85% CYP76 4.82% POD 4.51% 4CL 4.46% NMT 3.69% UGT 2.97%

Other Families 61.03%

More Families (96)

IFS 57 2.92% UFGT 56 2.87% 7DLGT 55 2.82% STR 47 2.41% F3H 44 2.26% BR6OX2/CYP85A2 42 2.15% F3'H/CYP75B 38 1.95% DWF4/CYP90B1 38 1.95% T3O 37 1.9% PAL 36 1.85% IFR 35 1.79% GS 33 1.69% IO 31 1.59% PYKS 30 1.54% CODM/T6ODM 24 1.23% T16H 23 1.18% CAD 23 1.18% SMT1/SMT2/SMT3 23 1.18% HCT 22 1.13% CHS 21 1.08% H6H 19 0.97% F3'5'H/CYP75A 19 0.97% CYP71 19 0.97% G8O/G8H 16 0.82% TRI/TRII 15 0.77% COMT 15 0.77% 8HGO 14 0.72% ANR 14 0.72% RAS 14 0.72% SLS 13 0.67% CAS 13 0.67% CNMT 12 0.62% NCS 11 0.56% FNS 11 0.56% CSE 11 0.56% LAC 11 0.56% 7DLH 10 0.51% TAT 10 0.51% CPD/CYP90A1 10 0.51% CYP90D1 10 0.51% SGD 9 0.46% MPO 9 0.46% 16OMT 9 0.46% LAMT 8 0.41% PMT 8 0.41% BR6OX1/CYP85A1 8 0.41% DXS 7 0.36% GGPPS 7 0.36% BBE 6 0.31% CYP80B1 6 0.31% CCR 6 0.31% CPI1 6 0.31% TPS 6 0.31% COR 5 0.26% CYP80F1 5 0.26% CPR 5 0.26% DET2 5 0.26% AACT 5 0.26% GES 4 0.21% TDC 4 0.21% DFR 4 0.21% SQS/FDFT1 4 0.21% DXR 4 0.21% FPPS 4 0.21% CYP719 3 0.15% 6OMT_4OMT_SOMT 3 0.15% TYDC_DDC 3 0.15% F5H/CYP84A 3 0.15% ROT3/CYP90C1 3 0.15% SQE 3 0.15% DWF5 3 0.15% MVD 3 0.15% MVK 3 0.15% HDS/IspG 3 0.15% ADC 2 0.1% CHI 2 0.1% FLS 2 0.1% CCoAOMT 2 0.1% CYP51G1 2 0.1% SMO1/SMO2 2 0.1% DWF1 2 0.1% HYD1 2 0.1% HMGS 2 0.1% IDI 2 0.1% MCT/IspD 2 0.1% HMGR 2 0.1% ISY 1 0.05% ANS/LDOX 1 0.05% HPPR 1 0.05% DWF7 1 0.05% FK 1 0.05% HDR/IspH 1 0.05% CMK/IspE 1 0.05% MDS/IspF 1 0.05% GPPS 1 0.05% PMK 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	216	19	BAHD (73)	View species results
Phenylpropanoid pathway	177	11	POD (83)	View species results
Alkaloid pathway	162	21	7DLGT (34)	View species results
Flavonoid pathway	109	9	UFGT (51)	View species results
Rosmarinic acid pathway	71	7	C4H (30)	View species results
Steroid pathway	40	13	CAS (13)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	24	729	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	155	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
Pcil1390002270	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Pcil2320012060	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pcil2414140014240	Alkaloid	NMT	medium	borderline	NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Pcil2661880021570	Alkaloid	NMT	low	borderline	NMT__00021__sp_O64827_SUVR5_ARATH
Pcil2691930026490	Alkaloid	NMT	medium	pass	NMT__00021__sp_O64827_SUVR5_ARATH
Pcil2702830028350	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
Pcil2705410028560	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pcil2820190034340	Alkaloid	NMT	low	borderline	NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ
Pcil2828860035470	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pcil2875960039560	Alkaloid	NMT	medium	pass	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pcil2881970041140	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH
Pcil2953470049700	Alkaloid	NMT	low	borderline	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Pcil3005490059070	Alkaloid	NMT	medium	borderline	NMT__00070__sp_W5U2K2_NMT_CATRO
Pcil3010061450	Alkaloid	NMT	low	borderline	NMT__00060__sp_Q9MAT5_ANM10_ARATH
Pcil3016760064780	Alkaloid	NMT	medium	pass	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pcil3034060068850	Alkaloid	NMT	low	borderline	NMT__00051__sp_Q96565_AMNMT_HORVV
Pcil3042850074980	Alkaloid	NMT	medium	pass	NMT__00024__sp_P0CB22_ATX2_ARATH
Pcil3042850074990	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Pcil3051730080030	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
Pcil3057790085800	Alkaloid	NMT	low	borderline	NMT__00068__sp_Q9XI84_RBCMT_ARATH
Pcil3063830092080	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pcil3069000099930	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pcil3073040106160	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
Pcil3077640113990	Alkaloid	NMT	low	borderline	NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Pcil3078360114900	Alkaloid	NMT	medium	pass	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Pcil3079860116780	Alkaloid	NMT	medium	borderline	NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
Pcil3079860116790	Alkaloid	NMT	medium	borderline	NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
Pcil3080820118330	Alkaloid	NMT	low	borderline	NMT__00039__sp_Q84W92_ANM13_ARATH
Pcil3082140121090	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
Pcil3082510121540	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
Pcil3085530126310	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
Pcil3087250130100	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
Pcil3092650142910	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pcil3095160149130	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Pcil3099670163630	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Pcil3105860184160	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
Pcil3110510198300	Alkaloid	NMT	low	borderline	NMT__00021__sp_O64827_SUVR5_ARATH
Pcil3110820199190	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Pcil3111100200100	Alkaloid	NMT	medium	borderline	NMT__00057__sp_Q9FR44_PEAM1_ARATH
Pcil3111740202630	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
Pcil3113680210400	Alkaloid	NMT	medium	borderline	NMT__00043__sp_Q8H0D2_DXMT1_COFAR
Pcil3113810211030	Alkaloid	NMT	medium	borderline	NMT__00066__sp_Q9SU94_ANM11_ARATH
Pcil3114340213550	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pcil3116540222830	Alkaloid	NMT	medium	pass	NMT__00019__sp_O22781_SUVH2_ARATH
Pcil3117070225090	Alkaloid	NMT	medium	pass	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pcil3117500227280	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
Pcil3117830229010	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pcil3117970229900	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
Pcil3118250231340	Alkaloid	NMT	medium	borderline	NMT__00043__sp_Q8H0D2_DXMT1_COFAR
Pcil3118550232970	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH