PlantSME Plant secondary metabolism enzyme database

Plagiomnium ciliare (plagiomnium_ciliare)

Imported from atlas release summary for Plagiomnium ciliare.

775
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 216 19 BAHD (73) View species results
Phenylpropanoid pathway 177 11 POD (83) View species results
Alkaloid pathway 162 21 7DLGT (34) View species results
Flavonoid pathway 109 9 UFGT (51) View species results
Rosmarinic acid pathway 71 7 C4H (30) View species results
Steroid pathway 40 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 729 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 155 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Pcil2854510037290 Phenylpropanoid 4CL medium pass
Pcil2931780044370 Phenylpropanoid 4CL low borderline
Pcil2937000046310 Phenylpropanoid 4CL low borderline
Pcil2999850058410 Phenylpropanoid 4CL low borderline
Pcil3006710059430 Phenylpropanoid 4CL low borderline
Pcil3008870060790 Phenylpropanoid 4CL low borderline
Pcil3058240086480 Phenylpropanoid 4CL medium pass
Pcil3060860088640 Phenylpropanoid 4CL low borderline
Pcil3093050143520 Phenylpropanoid 4CL medium pass
Pcil3093250144170 Phenylpropanoid 4CL medium pass
Pcil3097180155760 Phenylpropanoid 4CL low borderline
Pcil3097520156770 Phenylpropanoid 4CL low borderline
Pcil3106170184950 Phenylpropanoid 4CL medium pass
Pcil3108740192570 Phenylpropanoid 4CL low borderline
Pcil3118320231850 Phenylpropanoid 4CL low borderline
Pcil3120560240790 Phenylpropanoid 4CL medium pass
Pcil3120850242170 Phenylpropanoid 4CL medium pass
Pcil3128000273310 Phenylpropanoid 4CL low borderline
Pcil3131270288470 Phenylpropanoid 4CL medium pass
Pcil3140250307170 Phenylpropanoid 4CL low borderline
Pcil3140250307180 Phenylpropanoid 4CL low borderline
Pcil3140260307190 Phenylpropanoid 4CL low borderline
Pcil3140260307200 Phenylpropanoid 4CL low borderline
Pcil3247100313540 Phenylpropanoid 4CL medium pass
Pcil3247110313560 Phenylpropanoid 4CL medium pass
Pcil4790334150 Phenylpropanoid 4CL medium pass
Pcil4840334650 Phenylpropanoid 4CL medium pass
Pcil5100336690 Phenylpropanoid 4CL low borderline
Pcil960341880 Phenylpropanoid 4CL low borderline
Pcil1360001560 Phenylpropanoid C3'H/CYP98A medium pass
Pcil1720005430 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil1900006620 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil1920006770 Phenylpropanoid C3'H/CYP98A low borderline
Pcil2350012410 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil2667240022260 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil2692750026670 Phenylpropanoid C3'H/CYP98A low borderline
Pcil2700028010 Phenylpropanoid C3'H/CYP98A low borderline
Pcil2791790031390 Phenylpropanoid C3'H/CYP98A low borderline
Pcil2803400032430 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil2872060038290 Phenylpropanoid C3'H/CYP98A medium pass
Pcil2874240038410 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil2921710042080 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil2932720044850 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil2934970046060 Phenylpropanoid C3'H/CYP98A low borderline
Pcil2939380047540 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil2951380049420 Phenylpropanoid C3'H/CYP98A medium borderline
Pcil2997230056920 Phenylpropanoid C3'H/CYP98A medium pass
Pcil3005570059100 Phenylpropanoid C3'H/CYP98A low borderline
Pcil3010110061540 Phenylpropanoid C3'H/CYP98A low borderline
Pcil3027790066330 Phenylpropanoid C3'H/CYP98A medium borderline