PlantSME Plant secondary metabolism enzyme database

Plagiomnium ciliare (plagiomnium_ciliare)

Imported from atlas release summary for Plagiomnium ciliare.

775
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 216 19 BAHD (73) View species results
Phenylpropanoid pathway 177 11 POD (83) View species results
Alkaloid pathway 162 21 7DLGT (34) View species results
Flavonoid pathway 109 9 UFGT (51) View species results
Rosmarinic acid pathway 71 7 C4H (30) View species results
Steroid pathway 40 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 729 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 155 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pcil3064100092550 Rosmarinic Acid PAL high pass
Pcil3107820189310 Rosmarinic Acid PAL medium pass
Pcil3107820189320 Rosmarinic Acid PAL high pass
Pcil3110520198320 Rosmarinic Acid PAL high pass
Pcil3112930206930 Rosmarinic Acid PAL high pass
Pcil3113310208590 Rosmarinic Acid PAL high pass
Pcil3120370239660 Rosmarinic Acid PAL high pass
Pcil3128950277380 Rosmarinic Acid PAL high pass
Pcil3132550293660 Rosmarinic Acid PAL low borderline
Pcil2922420042180 Rosmarinic Acid RAS medium pass
Pcil3038400070420 Rosmarinic Acid RAS low borderline
Pcil3050980079600 Rosmarinic Acid RAS low borderline
Pcil3054730081710 Rosmarinic Acid RAS medium pass
Pcil3062570090300 Rosmarinic Acid RAS low borderline
Pcil3102800173940 Rosmarinic Acid RAS medium pass
Pcil3110700198580 Rosmarinic Acid RAS low borderline
Pcil3112830206360 Rosmarinic Acid RAS medium pass
Pcil3112930206840 Rosmarinic Acid RAS medium pass
Pcil3113910211550 Rosmarinic Acid RAS medium pass
Pcil3115180216020 Rosmarinic Acid RAS medium pass
Pcil3115800218870 Rosmarinic Acid RAS medium pass
Pcil3118370232070 Rosmarinic Acid RAS medium pass
Pcil3134250299610 Rosmarinic Acid RAS medium pass
Pcil2724050030400 Rosmarinic Acid TAT medium pass
Pcil2816580033710 Rosmarinic Acid TAT low borderline
Pcil3039600071640 Rosmarinic Acid TAT low borderline
Pcil3089960136200 Rosmarinic Acid TAT low borderline
Pcil3102160172720 Rosmarinic Acid TAT medium pass
Pcil3103350175530 Rosmarinic Acid TAT low borderline
Pcil3107610188910 Rosmarinic Acid TAT low borderline
Pcil3116410222230 Rosmarinic Acid TAT low borderline
Pcil3117500227340 Rosmarinic Acid TAT medium pass
Pcil3118770233940 Rosmarinic Acid TAT low borderline