Pogonatum subfuscatum (pogonatum_subfuscatum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 25.79% Phenylpropanoid pathway 24.79% Alkaloid pathway 18.64% Rosmarinic acid pathway 13.14% Flavonoid pathway 11.48% Steroid pathway 6.16%

Family Distribution

601 Candidate Genes

C4H 8.35% C3'H/CYP98A 6.44% BAHD 5.25% CYP76 5.25% 4CL 4.47% POD 4.18% NMT 3.52% IFS 3.1%

Other Families 59.43%

More Families (94)

T3O 48 2.86% PAL 48 2.86% BR6OX2/CYP85A2 45 2.68% DWF4/CYP90B1 44 2.63% F3'H/CYP75B 43 2.57% STR 41 2.45% F3H 41 2.45% IFR 33 1.97% GS 30 1.79% CODM/T6ODM 29 1.73% PYKS 28 1.67% UGT 26 1.55% T16H 25 1.49% 7DLGT 23 1.37% UFGT 23 1.37% CYP71 22 1.31% SMT1/SMT2/SMT3 18 1.07% TRI/TRII 17 1.01% IO 17 1.01% CHS 17 1.01% F3'5'H/CYP75A 15 0.89% SGD 14 0.84% H6H 14 0.84% CAD 14 0.84% LAC 14 0.84% COMT 14 0.84% SLS 13 0.78% G8O/G8H 12 0.72% HCT 12 0.72% CAS 12 0.72% RAS 11 0.66% FNS 10 0.6% BBE 9 0.54% CSE 9 0.54% 16OMT 8 0.48% AACT 8 0.48% CNMT 7 0.42% NCS 7 0.42% DFR 7 0.42% F5H/CYP84A 7 0.42% CCR 7 0.42% ROT3/CYP90C1 7 0.42% CPD/CYP90A1 7 0.42% CYP80B1 6 0.36% 8HGO 6 0.36% PMT 6 0.36% CYP90D1 6 0.36% BR6OX1/CYP85A1 6 0.36% MPO 5 0.3% ANR 5 0.3% CPR 5 0.3% GGPPS 5 0.3% CYP719 4 0.24% 7DLH 4 0.24% CHI 4 0.24% TAT 4 0.24% SQS/FDFT1 4 0.24% SMO1/SMO2 4 0.24% MVK 4 0.24% DXS 4 0.24% LAMT 3 0.18% TDC 3 0.18% ANS/LDOX 3 0.18% DET2 3 0.18% DWF5 3 0.18% ADC 2 0.12% TYDC_DDC 2 0.12% COR 2 0.12% ISY 2 0.12% ODC 2 0.12% CCoAOMT 2 0.12% FK 2 0.12% CYP51G1 2 0.12% DWF7 2 0.12% DWF1 2 0.12% HMGR 2 0.12% MVD 2 0.12% IDI 2 0.12% FPPS 2 0.12% XMT_MXMT_DXMT 1 0.06% 6OMT_4OMT_SOMT 1 0.06% HPPR 1 0.06% HYD1 1 0.06% SQE 1 0.06% CPI1 1 0.06% TPS 1 0.06% PMK 1 0.06% MCT/IspD 1 0.06% CMK/IspE 1 0.06% HDS/IspG 1 0.06% HMGS 1 0.06% MDS/IspF 1 0.06% HDR/IspH 1 0.06% DXR 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	155	18	BAHD (62)	View species results
Phenylpropanoid pathway	149	11	POD (66)	View species results
Alkaloid pathway	112	18	NMT (19)	View species results
Rosmarinic acid pathway	79	7	C4H (41)	View species results
Flavonoid pathway	69	11	UFGT (23)	View species results
Steroid pathway	37	13	CAS (12)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	721	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	111	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: 4CL

Gene	Pathway	Family	Confidence	Status	Best Target
Psubff1000240002250	Rosmarinic Acid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
Psubff1008470026170	Rosmarinic Acid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Psubff1010580036040	Rosmarinic Acid	4CL	low	borderline	4CL__00018__sp_Q9S777_4CL3_ARATH
Psubff1570055930	Rosmarinic Acid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
Psubff1830061800	Rosmarinic Acid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Psubff190063400	Rosmarinic Acid	4CL	low	borderline	4CL__00012__sp_Q84P21_4CLL5_ARATH
Psubff20065150	Rosmarinic Acid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Psubff240073610	Rosmarinic Acid	4CL	low	borderline	4CL__00018__sp_Q9S777_4CL3_ARATH
Psubff2690078530	Rosmarinic Acid	4CL	medium	pass	4CL__00002__sp_I3PB37_4CL1_PETHY
Psubff3160087060	Rosmarinic Acid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Psubff3220088600	Rosmarinic Acid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Psubff3320090250	Rosmarinic Acid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Psubff3790098680	Rosmarinic Acid	4CL	low	borderline	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Psubff40102370	Rosmarinic Acid	4CL	low	borderline	4CL__00014__sp_Q84P24_4CLL6_ARATH
Psubff480119890	Rosmarinic Acid	4CL	low	borderline	4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Psubff4900122160	Rosmarinic Acid	4CL	low	borderline	4CL__00018__sp_Q9S777_4CL3_ARATH
Psubff5010125580	Rosmarinic Acid	4CL	low	borderline	4CL__00007__sp_Q42524_4CL1_ARATH
Psubff5850147280	Rosmarinic Acid	4CL	low	borderline	4CL__00006__sp_P17814_4CL1_ORYSJ
Psubff7300183840	Rosmarinic Acid	4CL	medium	pass	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Psubff7550188480	Rosmarinic Acid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Psubff7570189140	Rosmarinic Acid	4CL	low	borderline	4CL__00005__sp_P0C5B6_4CLL4_ARATH
Psubff7730193610	Rosmarinic Acid	4CL	low	borderline	4CL__00013__sp_Q84P23_4CLL9_ARATH
Psubff8450210070	Rosmarinic Acid	4CL	low	borderline	4CL__00014__sp_Q84P24_4CLL6_ARATH
Psubff90224640	Rosmarinic Acid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Psubff926300230310	Rosmarinic Acid	4CL	medium	pass	4CL__00009__sp_Q67W82_4CL4_ORYSJ