Pogonatum subfuscatum (pogonatum_subfuscatum)
Imported from atlas release summary for Pogonatum subfuscatum.
846
Candidate Protein Records
601
Pathway-Level Records
1676
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1676
Family-Level Calls
C4H
8.35%
C3'H/CYP98A
6.44%
BAHD
5.25%
CYP76
5.25%
4CL
4.47%
POD
4.18%
NMT
3.52%
IFS
3.1%
Other Families
59.43%
More Families (94)
T3O
48
2.86%
PAL
48
2.86%
BR6OX2/CYP85A2
45
2.68%
DWF4/CYP90B1
44
2.63%
F3'H/CYP75B
43
2.57%
STR
41
2.45%
F3H
41
2.45%
IFR
33
1.97%
GS
30
1.79%
CODM/T6ODM
29
1.73%
PYKS
28
1.67%
UGT
26
1.55%
T16H
25
1.49%
7DLGT
23
1.37%
UFGT
23
1.37%
CYP71
22
1.31%
SMT1/SMT2/SMT3
18
1.07%
TRI/TRII
17
1.01%
IO
17
1.01%
CHS
17
1.01%
F3'5'H/CYP75A
15
0.89%
SGD
14
0.84%
H6H
14
0.84%
CAD
14
0.84%
LAC
14
0.84%
COMT
14
0.84%
SLS
13
0.78%
G8O/G8H
12
0.72%
HCT
12
0.72%
CAS
12
0.72%
RAS
11
0.66%
FNS
10
0.6%
BBE
9
0.54%
CSE
9
0.54%
16OMT
8
0.48%
AACT
8
0.48%
CNMT
7
0.42%
NCS
7
0.42%
DFR
7
0.42%
F5H/CYP84A
7
0.42%
CCR
7
0.42%
ROT3/CYP90C1
7
0.42%
CPD/CYP90A1
7
0.42%
CYP80B1
6
0.36%
8HGO
6
0.36%
PMT
6
0.36%
CYP90D1
6
0.36%
BR6OX1/CYP85A1
6
0.36%
MPO
5
0.3%
ANR
5
0.3%
CPR
5
0.3%
GGPPS
5
0.3%
CYP719
4
0.24%
7DLH
4
0.24%
CHI
4
0.24%
TAT
4
0.24%
SQS/FDFT1
4
0.24%
SMO1/SMO2
4
0.24%
MVK
4
0.24%
DXS
4
0.24%
LAMT
3
0.18%
TDC
3
0.18%
ANS/LDOX
3
0.18%
DET2
3
0.18%
DWF5
3
0.18%
ADC
2
0.12%
TYDC_DDC
2
0.12%
COR
2
0.12%
ISY
2
0.12%
ODC
2
0.12%
CCoAOMT
2
0.12%
FK
2
0.12%
CYP51G1
2
0.12%
DWF7
2
0.12%
DWF1
2
0.12%
HMGR
2
0.12%
MVD
2
0.12%
IDI
2
0.12%
FPPS
2
0.12%
XMT_MXMT_DXMT
1
0.06%
6OMT_4OMT_SOMT
1
0.06%
HPPR
1
0.06%
HYD1
1
0.06%
SQE
1
0.06%
CPI1
1
0.06%
TPS
1
0.06%
PMK
1
0.06%
MCT/IspD
1
0.06%
CMK/IspE
1
0.06%
HDS/IspG
1
0.06%
HMGS
1
0.06%
MDS/IspF
1
0.06%
HDR/IspH
1
0.06%
DXR
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 155 | 18 | BAHD (62) | View species results |
| Phenylpropanoid pathway | 149 | 11 | POD (66) | View species results |
| Alkaloid pathway | 112 | 18 | NMT (19) | View species results |
| Rosmarinic acid pathway | 79 | 7 | C4H (41) | View species results |
| Flavonoid pathway | 69 | 11 | UFGT (23) | View species results |
| Steroid pathway | 37 | 13 | CAS (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 721 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 111 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Psubff7460186140 | Terpenoid | CYP76 | medium | pass |
| Psubff7570189000 | Terpenoid | CYP76 | medium | pass |
| Psubff7690192520 | Terpenoid | CYP76 | medium | pass |
| Psubff7730193500 | Terpenoid | CYP76 | medium | pass |
| Psubff819440205540 | Terpenoid | CYP76 | medium | borderline |
| Psubff8490210590 | Terpenoid | CYP76 | medium | pass |
| Psubff8680215370 | Terpenoid | CYP76 | medium | pass |
| Psubff870210216600 | Terpenoid | CYP76 | medium | pass |
| Psubff880219520 | Terpenoid | CYP76 | medium | borderline |
| Psubff882340219890 | Terpenoid | CYP76 | medium | pass |
| Psubff8840220380 | Terpenoid | CYP76 | medium | borderline |
| Psubff8870221120 | Terpenoid | CYP76 | medium | borderline |
| Psubff890490221640 | Terpenoid | CYP76 | medium | borderline |
| Psubff9010225240 | Terpenoid | CYP76 | medium | pass |
| Psubff904590226050 | Terpenoid | CYP76 | medium | borderline |
| Psubff9090227190 | Terpenoid | CYP76 | medium | pass |
| Psubff9100227670 | Terpenoid | CYP76 | low | borderline |
| Psubff931700231940 | Terpenoid | CYP76 | medium | pass |
| Psubff958060235860 | Terpenoid | CYP76 | medium | pass |
| Psubff989550248410 | Terpenoid | CYP76 | medium | pass |
| Psubff995950255190 | Terpenoid | CYP76 | low | borderline |
| Psubff996830256020 | Terpenoid | DXR | high | pass |
| Psubff1004520011880 | Terpenoid | DXS | medium | pass |
| Psubff2510076300 | Terpenoid | DXS | medium | pass |
| Psubff8170204440 | Terpenoid | DXS | medium | pass |
| Psubff891440221860 | Terpenoid | DXS | medium | pass |
| Psubff7300183620 | Terpenoid | FPPS | medium | pass |
| Psubff8730217800 | Terpenoid | FPPS | medium | pass |
| Psubff460115790 | Terpenoid | GGPPS | medium | borderline |
| Psubff530133410 | Terpenoid | GGPPS | medium | borderline |
| Psubff540135620 | Terpenoid | GGPPS | medium | borderline |
| Psubff5670142550 | Terpenoid | GGPPS | medium | borderline |
| Psubff6610167030 | Terpenoid | GGPPS | medium | borderline |
| Psubff920410228600 | Terpenoid | HDR/IspH | high | pass |
| Psubff4560114900 | Terpenoid | HDS/IspG | high | pass |
| Psubff2290071430 | Terpenoid | HMGR | medium | pass |
| Psubff5600140930 | Terpenoid | HMGR | medium | pass |
| Psubff822450206090 | Terpenoid | HMGS | high | pass |
| Psubff6420163010 | Terpenoid | IDI | medium | pass |
| Psubff6420163030 | Terpenoid | IDI | low | borderline |
| Psubff2180069540 | Terpenoid | MCT/IspD | high | pass |
| Psubff8510211630 | Terpenoid | MDS/IspF | high | pass |
| Psubff320088280 | Terpenoid | MVD | low | borderline |
| Psubff570143020 | Terpenoid | MVD | medium | pass |
| Psubff1004370011370 | Terpenoid | MVK | low | borderline |
| Psubff1004930013430 | Terpenoid | MVK | low | borderline |
| Psubff5110128470 | Terpenoid | MVK | low | borderline |
| Psubff6420163120 | Terpenoid | MVK | medium | pass |
| Psubff1520055360 | Terpenoid | PMK | medium | pass |
| Psubff1002870007820 | Terpenoid | TPS | low | borderline |