PlantSME Plant secondary metabolism enzyme database

Polytrichastrum ohioense (polytrichastrum_ohioense)

Imported from atlas release summary for Polytrichastrum ohioense.

1044
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.77% Terpenoid pathway 24.14% Alkaloid pathway 21.65% Rosmarinic acid pathway 12.16% Flavonoid pathway 11.69% Steroid pathway 4.6%
Family Distribution
C4H 7.7% C3'H/CYP98A 6.37% CYP76 5.32% BAHD 4.82% 4CL 4.75% NMT 4.17% POD 3.99% IFS 3.13%
Other Families 59.75%
More Families (95)
F3H 78 2.81% PAL 78 2.81% DWF4/CYP90B1 76 2.73% BR6OX2/CYP85A2 71 2.55% T3O 69 2.48% STR 59 2.12% CODM/T6ODM 52 1.87% IFR 52 1.87% PYKS 48 1.73% F3'H/CYP75B 48 1.73% GS 47 1.69% UGT 47 1.69% 7DLGT 42 1.51% H6H 39 1.4% UFGT 39 1.4% G8O/G8H 38 1.37% IO 36 1.29% F3'5'H/CYP75A 35 1.26% LAC 35 1.26% FNS 34 1.22% CHS 33 1.19% T16H 30 1.08% SGD 28 1.01% COMT 28 1.01% SMT1/SMT2/SMT3 28 1.01% CYP71 28 1.01% TRI/TRII 22 0.79% CAD 22 0.79% 7DLH 21 0.76% CSE 20 0.72% RAS 18 0.65% HCT 17 0.61% BR6OX1/CYP85A1 16 0.58% SLS 12 0.43% DXS 12 0.43% CYP80B1 11 0.4% F5H/CYP84A 11 0.4% SQS/FDFT1 11 0.4% CPD/CYP90A1 11 0.4% BBE 10 0.36% NCS 10 0.36% CNMT 9 0.32% MPO 9 0.32% ANR 9 0.32% DFR 9 0.32% CAS 9 0.32% GGPPS 9 0.32% 16OMT 8 0.29% COR 8 0.29% ANS/LDOX 8 0.29% CCR 8 0.29% CYP719 7 0.25% 8HGO 7 0.25% HMGR 7 0.25% AACT 7 0.25% ADC 6 0.22% PMT 6 0.22% SMO1/SMO2 6 0.22% TYDC_DDC 5 0.18% CHI 5 0.18% TAT 5 0.18% CPR 5 0.18% ROT3/CYP90C1 5 0.18% DET2 5 0.18% CYP90D1 5 0.18% ODC 4 0.14% DWF5 4 0.14% MVK 4 0.14% MVD 4 0.14% TDC 3 0.11% ISY 3 0.11% FLS 3 0.11% CCoAOMT 3 0.11% HPPR 3 0.11% SQE 3 0.11% FK 3 0.11% CYP51G1 3 0.11% HYD1 3 0.11% HMGS 3 0.11% LAMT 2 0.07% 6OMT_4OMT_SOMT 2 0.07% CPI1 2 0.07% MCT/IspD 2 0.07% IDI 2 0.07% HDS/IspG 2 0.07% FPPS 2 0.07% DXR 2 0.07% MDS/IspF 2 0.07% HDR/IspH 2 0.07% XMT_MXMT_DXMT 1 0.04% DWF7 1 0.04% DWF1 1 0.04% PMK 1 0.04% CMK/IspE 1 0.04% TPS 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 269 12 POD (100) View species results
Terpenoid pathway 252 18 BAHD (94) View species results
Alkaloid pathway 226 23 NMT (50) View species results
Rosmarinic acid pathway 127 7 C4H (59) View species results
Flavonoid pathway 122 10 UFGT (36) View species results
Steroid pathway 48 13 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 169 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Pohi1070000500 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Pohi1160001230 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Pohi1550003750 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Pohi1550003820 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
Pohi1660005310 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pohi1800007110 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pohi2270012160 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Pohi2390013970 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pohi2460015400 Alkaloid NMT low borderline NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Pohi2500016170 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Pohi2550017320 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Pohi270990022150 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
Pohi277070023570 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Pohi280120024100 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Pohi282800025450 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pohi282910025530 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
Pohi327380032020 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pohi355740037030 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Pohi357260037730 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Pohi410530043510 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Pohi416600045000 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Pohi419060046310 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
Pohi431330050540 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Pohi444930055620 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Pohi462300066400 Alkaloid NMT medium pass NMT__00030__sp_Q43088_RBCMT_PEA
Pohi465670069430 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Pohi465990070040 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pohi479730095390 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Pohi482180104910 Alkaloid NMT medium pass NMT__00023__sp_O82210_ANM12_ARATH
Pohi482650107350 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pohi483920112950 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Pohi484140114260 Alkaloid NMT medium pass NMT__00018__sp_I1M2U5_NAMT1_SOYBN
Pohi484430115850 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pohi485220119900 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Pohi485320120700 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Pohi485480121850 Alkaloid NMT medium borderline NMT__00018__sp_I1M2U5_NAMT1_SOYBN
Pohi486460127670 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pohi486490127900 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Pohi486890130640 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
Pohi487080131660 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pohi487090131710 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Pohi487090131720 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Pohi487090131730 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
Pohi487150131930 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pohi488040137490 Alkaloid NMT low borderline NMT__00021__sp_O64827_SUVR5_ARATH
Pohi488910142060 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Pohi491900167000 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Pohi492500173120 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Pohi492930178020 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Pohi492940178090 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO