Polytrichastrum ohioense (polytrichastrum_ohioense)
Imported from atlas release summary for Polytrichastrum ohioense.
1044
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1044
Candidate Genes
C4H
7.7%
C3'H/CYP98A
6.37%
CYP76
5.32%
BAHD
4.82%
4CL
4.75%
NMT
4.17%
POD
3.99%
IFS
3.13%
Other Families
59.75%
More Families (95)
F3H
78
2.81%
PAL
78
2.81%
DWF4/CYP90B1
76
2.73%
BR6OX2/CYP85A2
71
2.55%
T3O
69
2.48%
STR
59
2.12%
CODM/T6ODM
52
1.87%
IFR
52
1.87%
PYKS
48
1.73%
F3'H/CYP75B
48
1.73%
GS
47
1.69%
UGT
47
1.69%
7DLGT
42
1.51%
H6H
39
1.4%
UFGT
39
1.4%
G8O/G8H
38
1.37%
IO
36
1.29%
F3'5'H/CYP75A
35
1.26%
LAC
35
1.26%
FNS
34
1.22%
CHS
33
1.19%
T16H
30
1.08%
SGD
28
1.01%
COMT
28
1.01%
SMT1/SMT2/SMT3
28
1.01%
CYP71
28
1.01%
TRI/TRII
22
0.79%
CAD
22
0.79%
7DLH
21
0.76%
CSE
20
0.72%
RAS
18
0.65%
HCT
17
0.61%
BR6OX1/CYP85A1
16
0.58%
SLS
12
0.43%
DXS
12
0.43%
CYP80B1
11
0.4%
F5H/CYP84A
11
0.4%
SQS/FDFT1
11
0.4%
CPD/CYP90A1
11
0.4%
BBE
10
0.36%
NCS
10
0.36%
CNMT
9
0.32%
MPO
9
0.32%
ANR
9
0.32%
DFR
9
0.32%
CAS
9
0.32%
GGPPS
9
0.32%
16OMT
8
0.29%
COR
8
0.29%
ANS/LDOX
8
0.29%
CCR
8
0.29%
CYP719
7
0.25%
8HGO
7
0.25%
HMGR
7
0.25%
AACT
7
0.25%
ADC
6
0.22%
PMT
6
0.22%
SMO1/SMO2
6
0.22%
TYDC_DDC
5
0.18%
CHI
5
0.18%
TAT
5
0.18%
CPR
5
0.18%
ROT3/CYP90C1
5
0.18%
DET2
5
0.18%
CYP90D1
5
0.18%
ODC
4
0.14%
DWF5
4
0.14%
MVK
4
0.14%
MVD
4
0.14%
TDC
3
0.11%
ISY
3
0.11%
FLS
3
0.11%
CCoAOMT
3
0.11%
HPPR
3
0.11%
SQE
3
0.11%
FK
3
0.11%
CYP51G1
3
0.11%
HYD1
3
0.11%
HMGS
3
0.11%
LAMT
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
CPI1
2
0.07%
MCT/IspD
2
0.07%
IDI
2
0.07%
HDS/IspG
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
MDS/IspF
2
0.07%
HDR/IspH
2
0.07%
XMT_MXMT_DXMT
1
0.04%
DWF7
1
0.04%
DWF1
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
TPS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 269 | 12 | POD (100) | View species results |
| Terpenoid pathway | 252 | 18 | BAHD (94) | View species results |
| Alkaloid pathway | 226 | 23 | NMT (50) | View species results |
| Rosmarinic acid pathway | 127 | 7 | C4H (59) | View species results |
| Flavonoid pathway | 122 | 10 | UFGT (36) | View species results |
| Steroid pathway | 48 | 13 | SMT1/SMT2/SMT3 (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1159 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 169 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Pohi1550003930 | Alkaloid | STR | medium | pass |
| Pohi1680005560 | Alkaloid | STR | low | borderline |
| Pohi1900008420 | Alkaloid | STR | medium | pass |
| Pohi1970008750 | Alkaloid | STR | low | borderline |
| Pohi2280012350 | Alkaloid | STR | medium | pass |
| Pohi418810046080 | Alkaloid | STR | medium | pass |
| Pohi425060048980 | Alkaloid | STR | low | borderline |
| Pohi434880051800 | Alkaloid | STR | low | borderline |
| Pohi435300052040 | Alkaloid | STR | low | borderline |
| Pohi435560052470 | Alkaloid | STR | low | borderline |
| Pohi436430052820 | Alkaloid | STR | low | borderline |
| Pohi444340055460 | Alkaloid | STR | low | borderline |
| Pohi457370063200 | Alkaloid | STR | low | borderline |
| Pohi469640073000 | Alkaloid | STR | low | borderline |
| Pohi478390090940 | Alkaloid | STR | medium | pass |
| Pohi480300097990 | Alkaloid | STR | low | borderline |
| Pohi480720099180 | Alkaloid | STR | low | borderline |
| Pohi481110100150 | Alkaloid | STR | medium | pass |
| Pohi481970104290 | Alkaloid | STR | low | borderline |
| Pohi485150119470 | Alkaloid | STR | low | borderline |
| Pohi487060131490 | Alkaloid | STR | low | borderline |
| Pohi487210132590 | Alkaloid | STR | low | borderline |
| Pohi487440133840 | Alkaloid | STR | medium | pass |
| Pohi487530134380 | Alkaloid | STR | medium | pass |
| Pohi487600134820 | Alkaloid | STR | low | borderline |
| Pohi488380139220 | Alkaloid | STR | low | borderline |
| Pohi488400139250 | Alkaloid | STR | low | borderline |
| Pohi488660140970 | Alkaloid | STR | low | borderline |
| Pohi488810141490 | Alkaloid | STR | low | borderline |
| Pohi490680155260 | Alkaloid | STR | low | borderline |
| Pohi492290171360 | Alkaloid | STR | low | borderline |
| Pohi493940189240 | Alkaloid | STR | low | borderline |
| Pohi494550194730 | Alkaloid | STR | low | borderline |
| Pohi494840197950 | Alkaloid | STR | low | borderline |
| Pohi495070199940 | Alkaloid | STR | medium | pass |
| Pohi496530214140 | Alkaloid | STR | low | borderline |
| Pohi497030220390 | Alkaloid | STR | medium | pass |
| Pohi497300223030 | Alkaloid | STR | low | borderline |
| Pohi497360224190 | Alkaloid | STR | medium | pass |
| Pohi499130241540 | Alkaloid | STR | low | borderline |
| Pohi499130241580 | Alkaloid | STR | low | borderline |
| Pohi500980257820 | Alkaloid | STR | low | borderline |
| Pohi502450271950 | Alkaloid | STR | low | borderline |
| Pohi502450271960 | Alkaloid | STR | low | borderline |
| Pohi502960276050 | Alkaloid | STR | low | borderline |
| Pohi503950285350 | Alkaloid | STR | low | borderline |
| Pohi504350288340 | Alkaloid | STR | low | borderline |
| Pohi504350288350 | Alkaloid | STR | low | borderline |
| Pohi505480300090 | Alkaloid | STR | medium | pass |
| Pohi505480300190 | Alkaloid | STR | medium | pass |