Polytrichastrum ohioense (polytrichastrum_ohioense)
Imported from atlas release summary for Polytrichastrum ohioense.
1394
Candidate Protein Records
1044
Pathway-Level Records
2780
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2780
Family-Level Calls
C4H
7.7%
C3'H/CYP98A
6.37%
CYP76
5.32%
BAHD
4.82%
4CL
4.75%
NMT
4.17%
POD
3.99%
IFS
3.13%
Other Families
59.75%
More Families (95)
F3H
78
2.81%
PAL
78
2.81%
DWF4/CYP90B1
76
2.73%
BR6OX2/CYP85A2
71
2.55%
T3O
69
2.48%
STR
59
2.12%
CODM/T6ODM
52
1.87%
IFR
52
1.87%
PYKS
48
1.73%
F3'H/CYP75B
48
1.73%
GS
47
1.69%
UGT
47
1.69%
7DLGT
42
1.51%
H6H
39
1.4%
UFGT
39
1.4%
G8O/G8H
38
1.37%
IO
36
1.29%
F3'5'H/CYP75A
35
1.26%
LAC
35
1.26%
FNS
34
1.22%
CHS
33
1.19%
T16H
30
1.08%
SGD
28
1.01%
COMT
28
1.01%
SMT1/SMT2/SMT3
28
1.01%
CYP71
28
1.01%
TRI/TRII
22
0.79%
CAD
22
0.79%
7DLH
21
0.76%
CSE
20
0.72%
RAS
18
0.65%
HCT
17
0.61%
BR6OX1/CYP85A1
16
0.58%
SLS
12
0.43%
DXS
12
0.43%
CYP80B1
11
0.4%
F5H/CYP84A
11
0.4%
SQS/FDFT1
11
0.4%
CPD/CYP90A1
11
0.4%
BBE
10
0.36%
NCS
10
0.36%
CNMT
9
0.32%
MPO
9
0.32%
ANR
9
0.32%
DFR
9
0.32%
CAS
9
0.32%
GGPPS
9
0.32%
16OMT
8
0.29%
COR
8
0.29%
ANS/LDOX
8
0.29%
CCR
8
0.29%
CYP719
7
0.25%
8HGO
7
0.25%
HMGR
7
0.25%
AACT
7
0.25%
ADC
6
0.22%
PMT
6
0.22%
SMO1/SMO2
6
0.22%
TYDC_DDC
5
0.18%
CHI
5
0.18%
TAT
5
0.18%
CPR
5
0.18%
ROT3/CYP90C1
5
0.18%
DET2
5
0.18%
CYP90D1
5
0.18%
ODC
4
0.14%
DWF5
4
0.14%
MVK
4
0.14%
MVD
4
0.14%
TDC
3
0.11%
ISY
3
0.11%
FLS
3
0.11%
CCoAOMT
3
0.11%
HPPR
3
0.11%
SQE
3
0.11%
FK
3
0.11%
CYP51G1
3
0.11%
HYD1
3
0.11%
HMGS
3
0.11%
LAMT
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
CPI1
2
0.07%
MCT/IspD
2
0.07%
IDI
2
0.07%
HDS/IspG
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
MDS/IspF
2
0.07%
HDR/IspH
2
0.07%
XMT_MXMT_DXMT
1
0.04%
DWF7
1
0.04%
DWF1
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
TPS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 269 | 12 | POD (100) | View species results |
| Terpenoid pathway | 252 | 18 | BAHD (94) | View species results |
| Alkaloid pathway | 226 | 23 | NMT (50) | View species results |
| Rosmarinic acid pathway | 127 | 7 | C4H (59) | View species results |
| Flavonoid pathway | 122 | 10 | UFGT (36) | View species results |
| Steroid pathway | 48 | 13 | SMT1/SMT2/SMT3 (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1159 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 169 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pohi485220119900 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pohi485320120700 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Pohi485480121850 | Alkaloid | NMT | medium | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| Pohi486460127670 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Pohi486490127900 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Pohi486890130640 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Pohi487080131660 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Pohi487090131710 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pohi487090131720 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pohi487090131730 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pohi487150131930 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pohi488040137490 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Pohi488910142060 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Pohi491900167000 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Pohi492500173120 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Pohi492930178020 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Pohi492940178090 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Pohi493020179040 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Pohi493600185570 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pohi493920189090 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Pohi494130190990 | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pohi494130191000 | Alkaloid | NMT | low | borderline | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Pohi494130191040 | Alkaloid | NMT | low | borderline | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Pohi494130191050 | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pohi494650196120 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Pohi495820208850 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Pohi496200211160 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pohi496290211880 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Pohi496290211910 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Pohi496790217120 | Alkaloid | NMT | low | borderline | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Pohi496790217260 | Alkaloid | NMT | low | borderline | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Pohi497310223570 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pohi497470224940 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Pohi497540225700 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pohi497670227470 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Pohi497770228650 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Pohi497820228920 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pohi498370235990 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Pohi500200250100 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Pohi501200259250 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Pohi502170267340 | Alkaloid | NMT | low | borderline | NMT__00019__sp_O22781_SUVH2_ARATH |
| Pohi502170267360 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Pohi502320270090 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Pohi502380271050 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Pohi502960276180 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Pohi502960276210 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pohi502960276220 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pohi503180277990 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Pohi503510280660 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Pohi503680282810 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |