PlantSME Plant secondary metabolism enzyme database

Polytrichum strictum (polytrichum_strictum)

Imported from atlas release summary for Polytrichum strictum.

605
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.12% Terpenoid pathway 21.82% Alkaloid pathway 21.16% Flavonoid pathway 12.89% Rosmarinic acid pathway 12.4% Steroid pathway 5.62%
Family Distribution
C4H 7.57% C3'H/CYP98A 6.22% 4CL 5.81% CYP76 5.11% BAHD 4.82% POD 4.11% NMT 3.82% IFS 2.99%
Other Families 59.54%
More Families (95)
PAL 48 2.82% F3H 48 2.82% DWF4/CYP90B1 46 2.7% T3O 45 2.64% GS 40 2.35% STR 39 2.29% IFR 35 2.06% BR6OX2/CYP85A2 35 2.06% F3'H/CYP75B 34 2.0% CODM/T6ODM 31 1.82% UGT 26 1.53% PYKS 25 1.47% 7DLGT 24 1.41% UFGT 23 1.35% T16H 21 1.23% G8O/G8H 20 1.17% F3'5'H/CYP75A 20 1.17% IO 19 1.12% TRI/TRII 19 1.12% H6H 18 1.06% FNS 18 1.06% COMT 18 1.06% SMT1/SMT2/SMT3 18 1.06% CHS 15 0.88% CAD 15 0.88% LAC 14 0.82% CNMT 12 0.7% CPD/CYP90A1 12 0.7% BR6OX1/CYP85A1 12 0.7% CYP71 12 0.7% SGD 11 0.65% 16OMT 10 0.59% HCT 10 0.59% RAS 10 0.59% 7DLH 9 0.53% CSE 9 0.53% CAS 8 0.47% CYP719 7 0.41% ANR 7 0.41% CYP90D1 7 0.41% GGPPS 7 0.41% SLS 6 0.35% CYP80B1 6 0.35% COR 6 0.35% NCS 6 0.35% CCR 6 0.35% CPR 6 0.35% 8HGO 5 0.29% BBE 5 0.29% MPO 5 0.29% DFR 5 0.29% SQS/FDFT1 5 0.29% AACT 5 0.29% PMT 4 0.23% CHI 4 0.23% F5H/CYP84A 4 0.23% ROT3/CYP90C1 4 0.23% DET2 4 0.23% ISY 3 0.18% TDC 3 0.18% HPPR 3 0.18% TAT 3 0.18% SQE 3 0.18% SMO1/SMO2 3 0.18% CYP51G1 3 0.18% DWF1 3 0.18% DWF5 3 0.18% CMK/IspE 3 0.18% DXS 3 0.18% HMGR 3 0.18% MVK 3 0.18% 6OMT_4OMT_SOMT 2 0.12% ADC 2 0.12% LAMT 2 0.12% ODC 2 0.12% ANS/LDOX 2 0.12% CCoAOMT 2 0.12% FPPS 2 0.12% MVD 2 0.12% CYP80F1 1 0.06% GES 1 0.06% TYDC_DDC 1 0.06% FLS 1 0.06% FK 1 0.06% HYD1 1 0.06% DWF7 1 0.06% CPI1 1 0.06% TPS 1 0.06% HDR/IspH 1 0.06% MDS/IspF 1 0.06% HDS/IspG 1 0.06% IDI 1 0.06% PMK 1 0.06% MCT/IspD 1 0.06% HMGS 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 158 12 POD (65) View species results
Terpenoid pathway 132 17 BAHD (57) View species results
Alkaloid pathway 128 16 NMT (23) View species results
Flavonoid pathway 78 10 UFGT (22) View species results
Rosmarinic acid pathway 75 7 C4H (32) View species results
Steroid pathway 34 13 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 696 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 102 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Pstr1137020001540 Flavonoid FNS medium borderline
Pstr1338630005630 Flavonoid FNS medium borderline
Pstr1435390008150 Flavonoid FNS low borderline
Pstr1654680034440 Flavonoid FNS medium borderline
Pstr1710490064420 Flavonoid FNS low borderline
Pstr1720720075180 Flavonoid FNS medium borderline
Pstr1731590091450 Flavonoid FNS medium borderline
Pstr1734250095570 Flavonoid FNS medium borderline
Pstr1734820096900 Flavonoid FNS medium borderline
Pstr1749880127470 Flavonoid FNS medium borderline
Pstr1749880127480 Flavonoid FNS medium borderline
Pstr1752730134100 Flavonoid FNS medium borderline
Pstr1753410135320 Flavonoid FNS medium borderline
Pstr1755720140820 Flavonoid FNS medium borderline
Pstr1757830146110 Flavonoid FNS medium borderline
Pstr1769210170270 Flavonoid FNS low borderline
Pstr1779360189870 Flavonoid FNS medium borderline
Pstr1780190192020 Flavonoid FNS medium borderline