Polytrichum strictum (polytrichum_strictum)
Imported from atlas release summary for Polytrichum strictum.
605
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
605
Candidate Genes
C4H
7.57%
C3'H/CYP98A
6.22%
4CL
5.81%
CYP76
5.11%
BAHD
4.82%
POD
4.11%
NMT
3.82%
IFS
2.99%
Other Families
59.54%
More Families (95)
PAL
48
2.82%
F3H
48
2.82%
DWF4/CYP90B1
46
2.7%
T3O
45
2.64%
GS
40
2.35%
STR
39
2.29%
IFR
35
2.06%
BR6OX2/CYP85A2
35
2.06%
F3'H/CYP75B
34
2.0%
CODM/T6ODM
31
1.82%
UGT
26
1.53%
PYKS
25
1.47%
7DLGT
24
1.41%
UFGT
23
1.35%
T16H
21
1.23%
G8O/G8H
20
1.17%
F3'5'H/CYP75A
20
1.17%
IO
19
1.12%
TRI/TRII
19
1.12%
H6H
18
1.06%
FNS
18
1.06%
COMT
18
1.06%
SMT1/SMT2/SMT3
18
1.06%
CHS
15
0.88%
CAD
15
0.88%
LAC
14
0.82%
CNMT
12
0.7%
CPD/CYP90A1
12
0.7%
BR6OX1/CYP85A1
12
0.7%
CYP71
12
0.7%
SGD
11
0.65%
16OMT
10
0.59%
HCT
10
0.59%
RAS
10
0.59%
7DLH
9
0.53%
CSE
9
0.53%
CAS
8
0.47%
CYP719
7
0.41%
ANR
7
0.41%
CYP90D1
7
0.41%
GGPPS
7
0.41%
SLS
6
0.35%
CYP80B1
6
0.35%
COR
6
0.35%
NCS
6
0.35%
CCR
6
0.35%
CPR
6
0.35%
8HGO
5
0.29%
BBE
5
0.29%
MPO
5
0.29%
DFR
5
0.29%
SQS/FDFT1
5
0.29%
AACT
5
0.29%
PMT
4
0.23%
CHI
4
0.23%
F5H/CYP84A
4
0.23%
ROT3/CYP90C1
4
0.23%
DET2
4
0.23%
ISY
3
0.18%
TDC
3
0.18%
HPPR
3
0.18%
TAT
3
0.18%
SQE
3
0.18%
SMO1/SMO2
3
0.18%
CYP51G1
3
0.18%
DWF1
3
0.18%
DWF5
3
0.18%
CMK/IspE
3
0.18%
DXS
3
0.18%
HMGR
3
0.18%
MVK
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
ADC
2
0.12%
LAMT
2
0.12%
ODC
2
0.12%
ANS/LDOX
2
0.12%
CCoAOMT
2
0.12%
FPPS
2
0.12%
MVD
2
0.12%
CYP80F1
1
0.06%
GES
1
0.06%
TYDC_DDC
1
0.06%
FLS
1
0.06%
FK
1
0.06%
HYD1
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
TPS
1
0.06%
HDR/IspH
1
0.06%
MDS/IspF
1
0.06%
HDS/IspG
1
0.06%
IDI
1
0.06%
PMK
1
0.06%
MCT/IspD
1
0.06%
HMGS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 158 | 12 | POD (65) | View species results |
| Terpenoid pathway | 132 | 17 | BAHD (57) | View species results |
| Alkaloid pathway | 128 | 16 | NMT (23) | View species results |
| Flavonoid pathway | 78 | 10 | UFGT (22) | View species results |
| Rosmarinic acid pathway | 75 | 7 | C4H (32) | View species results |
| Steroid pathway | 34 | 13 | CAS (8) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 696 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 102 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pstr1449980008930 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1451410009200 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1539320015080 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1667990038610 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1668650038990 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1668990039200 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1698390054220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1703840057700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1712220065250 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1714830068340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1715110068830 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1721620075910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1721960076910 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pstr1722750078610 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1725430081290 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pstr1725770082080 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1727750085580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1731530091280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1736500099460 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pstr1737880101890 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1737950101970 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1741580109230 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1741740109650 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1742380110900 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1744840115960 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1751630131110 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1752670134020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1764830162020 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1764830162060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1766240165290 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pstr1773050177070 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1774860180960 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pstr1776960184910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1778860188700 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pstr1781040193850 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1781120193950 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1781860195580 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pstr1782840197480 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pstr1786670205430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |