Polytrichum strictum (polytrichum_strictum)
Imported from atlas release summary for Polytrichum strictum.
605
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
605
Candidate Genes
C4H
7.57%
C3'H/CYP98A
6.22%
4CL
5.81%
CYP76
5.11%
BAHD
4.82%
POD
4.11%
NMT
3.82%
IFS
2.99%
Other Families
59.54%
More Families (95)
PAL
48
2.82%
F3H
48
2.82%
DWF4/CYP90B1
46
2.7%
T3O
45
2.64%
GS
40
2.35%
STR
39
2.29%
IFR
35
2.06%
BR6OX2/CYP85A2
35
2.06%
F3'H/CYP75B
34
2.0%
CODM/T6ODM
31
1.82%
UGT
26
1.53%
PYKS
25
1.47%
7DLGT
24
1.41%
UFGT
23
1.35%
T16H
21
1.23%
G8O/G8H
20
1.17%
F3'5'H/CYP75A
20
1.17%
IO
19
1.12%
TRI/TRII
19
1.12%
H6H
18
1.06%
FNS
18
1.06%
COMT
18
1.06%
SMT1/SMT2/SMT3
18
1.06%
CHS
15
0.88%
CAD
15
0.88%
LAC
14
0.82%
CNMT
12
0.7%
CPD/CYP90A1
12
0.7%
BR6OX1/CYP85A1
12
0.7%
CYP71
12
0.7%
SGD
11
0.65%
16OMT
10
0.59%
HCT
10
0.59%
RAS
10
0.59%
7DLH
9
0.53%
CSE
9
0.53%
CAS
8
0.47%
CYP719
7
0.41%
ANR
7
0.41%
CYP90D1
7
0.41%
GGPPS
7
0.41%
SLS
6
0.35%
CYP80B1
6
0.35%
COR
6
0.35%
NCS
6
0.35%
CCR
6
0.35%
CPR
6
0.35%
8HGO
5
0.29%
BBE
5
0.29%
MPO
5
0.29%
DFR
5
0.29%
SQS/FDFT1
5
0.29%
AACT
5
0.29%
PMT
4
0.23%
CHI
4
0.23%
F5H/CYP84A
4
0.23%
ROT3/CYP90C1
4
0.23%
DET2
4
0.23%
ISY
3
0.18%
TDC
3
0.18%
HPPR
3
0.18%
TAT
3
0.18%
SQE
3
0.18%
SMO1/SMO2
3
0.18%
CYP51G1
3
0.18%
DWF1
3
0.18%
DWF5
3
0.18%
CMK/IspE
3
0.18%
DXS
3
0.18%
HMGR
3
0.18%
MVK
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
ADC
2
0.12%
LAMT
2
0.12%
ODC
2
0.12%
ANS/LDOX
2
0.12%
CCoAOMT
2
0.12%
FPPS
2
0.12%
MVD
2
0.12%
CYP80F1
1
0.06%
GES
1
0.06%
TYDC_DDC
1
0.06%
FLS
1
0.06%
FK
1
0.06%
HYD1
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
TPS
1
0.06%
HDR/IspH
1
0.06%
MDS/IspF
1
0.06%
HDS/IspG
1
0.06%
IDI
1
0.06%
PMK
1
0.06%
MCT/IspD
1
0.06%
HMGS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 158 | 12 | POD (65) | View species results |
| Terpenoid pathway | 132 | 17 | BAHD (57) | View species results |
| Alkaloid pathway | 128 | 16 | NMT (23) | View species results |
| Flavonoid pathway | 78 | 10 | UFGT (22) | View species results |
| Rosmarinic acid pathway | 75 | 7 | C4H (32) | View species results |
| Steroid pathway | 34 | 13 | CAS (8) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 696 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 102 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pstr1712750066000 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Pstr1713170066440 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Pstr1715040068710 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Pstr1717060070870 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pstr1718640072420 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Pstr1718760072720 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Pstr1724250080430 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pstr1725940082420 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Pstr1729640089100 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Pstr1729640089110 | Alkaloid | NMT | low | borderline | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Pstr1735060097310 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pstr1738470103370 | Alkaloid | NMT | medium | borderline | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Pstr1739150104410 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Pstr1739170104490 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Pstr1739760105640 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pstr1740370106290 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Pstr1745280116740 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pstr1747290121060 | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pstr1749720126960 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Pstr1750430128800 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pstr1750520129120 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Pstr1751270130570 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Pstr1753260134990 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pstr1753260135000 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pstr1754340137470 | Alkaloid | NMT | medium | pass | NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ |
| Pstr1754770138360 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Pstr1758850148860 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Pstr1760290151930 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Pstr1760290151940 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pstr1760640152910 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Pstr1760900153550 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Pstr1761730155560 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Pstr1761810155830 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Pstr1764390161030 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Pstr1768090168640 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Pstr1769890170860 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Pstr1770700172010 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Pstr1772260175190 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| Pstr1775200181530 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Pstr1776070183420 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Pstr1778750188510 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Pstr1780530192960 | Alkaloid | NMT | low | borderline | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Pstr1780990193690 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pstr1784180200470 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Pstr1787160206970 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Pstr1791210215320 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Pstr1792010217080 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Pstr1967060223570 | Alkaloid | NMT | low | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Pstr1967070223590 | Alkaloid | NMT | low | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Pstr1791780216530 | Alkaloid | ODC | medium | pass | ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC |