PlantSME Plant secondary metabolism enzyme database

Populus alba (populus_alba)

Imported from atlas release summary for Populus alba.

2170
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 692 19 BAHD (266) View species results
Phenylpropanoid pathway 473 13 POD (196) View species results
Alkaloid pathway 429 25 NMT (73) View species results
Flavonoid pathway 260 14 UFGT (135) View species results
Rosmarinic acid pathway 159 7 4CL (54) View species results
Steroid pathway 157 13 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1752 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 431 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
GWHPAAEP028871 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GWHPAAEP031039 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP031040 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP031954 Flavonoid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
GWHPAAEP033053 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP033153 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
GWHPAAEP033570 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GWHPAAEP033804 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GWHPAAEP033913 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
GWHPAAEP034312 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
GWHPAAEP034404 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP035249 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP035250 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP035251 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP035450 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GWHPAAEP035530 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GWHPAAEP036259 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP036260 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP042449 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GWHPAAEP043429 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GWHPAAEP043835 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GWHPAAEP044491 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP044537 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP000145 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GWHPAAEP001139 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
GWHPAAEP003073 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GWHPAAEP003074 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GWHPAAEP003611 Phenylpropanoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP004857 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP005158 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP005159 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP005834 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP006169 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
GWHPAAEP006679 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP007141 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP008022 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP009686 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
GWHPAAEP010237 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GWHPAAEP010509 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
GWHPAAEP010711 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GWHPAAEP010849 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
GWHPAAEP010876 Phenylpropanoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP010877 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAEP011545 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP011546 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP011547 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP011548 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP011549 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAEP012351 Phenylpropanoid 4CL medium pass 4CL__00007__sp_Q42524_4CL1_ARATH
GWHPAAEP013000 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH