Populus alba (populus_alba)
Imported from atlas release summary for Populus alba.
2170
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2170
Candidate Genes
C4H
6.65%
BAHD
6.63%
UGT
4.68%
4CL
4.2%
C3'H/CYP98A
4.02%
POD
3.95%
7DLGT
3.76%
CYP76
3.35%
Other Families
62.77%
More Families (96)
F3H
167
3.2%
IFS
163
3.12%
UFGT
154
2.95%
NMT
133
2.55%
T3O
111
2.13%
H6H
97
1.86%
DWF4/CYP90B1
97
1.86%
CAD
93
1.78%
SMT1/SMT2/SMT3
86
1.65%
FNS
85
1.63%
CODM/T6ODM
83
1.59%
G8O/G8H
83
1.59%
STR
77
1.48%
F3'H/CYP75B
76
1.46%
IFR
72
1.38%
LAC
71
1.36%
CAS
66
1.26%
BR6OX2/CYP85A2
60
1.15%
T16H
58
1.11%
GES
53
1.02%
CSE
52
1.0%
HCT
51
0.98%
TPS
51
0.98%
CYP71
49
0.94%
PYKS
48
0.92%
F5H/CYP84A
48
0.92%
TAT
47
0.9%
ANR
44
0.84%
COMT
42
0.8%
IO
41
0.79%
CYP90D1
41
0.79%
GS
40
0.77%
SLS
40
0.77%
F3'5'H/CYP75A
40
0.77%
TRI/TRII
36
0.69%
16OMT
34
0.65%
CCR
34
0.65%
RAS
34
0.65%
DFR
32
0.61%
8HGO
27
0.52%
7DLH
24
0.46%
NCS
24
0.46%
SGD
24
0.46%
SQE
24
0.46%
LAMT
23
0.44%
BR6OX1/CYP85A1
23
0.44%
CPD/CYP90A1
22
0.42%
ISY
21
0.4%
CNMT
21
0.4%
CHS
20
0.38%
ANS/LDOX
19
0.36%
PMT
17
0.33%
COR
16
0.31%
MPO
15
0.29%
ROT3/CYP90C1
15
0.29%
CYP80B1
14
0.27%
CPR
14
0.27%
DET2
14
0.27%
SQS/FDFT1
14
0.27%
HPPR
13
0.25%
GGPPS
13
0.25%
AACT
12
0.23%
FPPS
11
0.21%
TYDC_DDC
9
0.17%
CYP719
9
0.17%
PAL
9
0.17%
SMO1/SMO2
9
0.17%
MVK
9
0.17%
CCoAOMT
8
0.15%
DXS
8
0.15%
MVD
8
0.15%
TDC
6
0.11%
HMGR
6
0.11%
ADC
5
0.1%
CHI
5
0.1%
MCT/IspD
5
0.1%
CMK/IspE
5
0.1%
DXR
4
0.08%
IDI
4
0.08%
BBE
3
0.06%
CYP80F1
3
0.06%
DWF5
3
0.06%
DWF1
3
0.06%
CYP51G1
3
0.06%
DWF7
3
0.06%
HDR/IspH
3
0.06%
XMT_MXMT_DXMT
2
0.04%
ODC
2
0.04%
HYD1
2
0.04%
PMK
2
0.04%
HMGS
2
0.04%
MDS/IspF
2
0.04%
HDS/IspG
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 692 | 19 | BAHD (266) | View species results |
| Phenylpropanoid pathway | 473 | 13 | POD (196) | View species results |
| Alkaloid pathway | 429 | 25 | NMT (73) | View species results |
| Flavonoid pathway | 260 | 14 | UFGT (135) | View species results |
| Rosmarinic acid pathway | 159 | 7 | 4CL (54) | View species results |
| Steroid pathway | 157 | 13 | CAS (60) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1752 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 431 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| GWHPAAEP000587 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| GWHPAAEP001036 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| GWHPAAEP001137 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| GWHPAAEP001175 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| GWHPAAEP001176 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| GWHPAAEP001780 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| GWHPAAEP001947 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| GWHPAAEP002766 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| GWHPAAEP002799 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| GWHPAAEP002800 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| GWHPAAEP002801 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| GWHPAAEP003045 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| GWHPAAEP003130 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| GWHPAAEP003131 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| GWHPAAEP003892 | Alkaloid | NMT | low | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| GWHPAAEP005322 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GWHPAAEP006207 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| GWHPAAEP006232 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| GWHPAAEP006233 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| GWHPAAEP006534 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| GWHPAAEP006960 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| GWHPAAEP006961 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| GWHPAAEP007272 | Alkaloid | NMT | medium | borderline | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| GWHPAAEP007802 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| GWHPAAEP007860 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GWHPAAEP008187 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| GWHPAAEP008188 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| GWHPAAEP008677 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| GWHPAAEP010395 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| GWHPAAEP010400 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| GWHPAAEP010992 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| GWHPAAEP012166 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| GWHPAAEP012409 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| GWHPAAEP012791 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| GWHPAAEP013020 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| GWHPAAEP013281 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GWHPAAEP013335 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| GWHPAAEP013966 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| GWHPAAEP014244 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| GWHPAAEP014245 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| GWHPAAEP014411 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| GWHPAAEP014880 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| GWHPAAEP014940 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| GWHPAAEP015076 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| GWHPAAEP015680 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| GWHPAAEP016952 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| GWHPAAEP016967 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| GWHPAAEP016968 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| GWHPAAEP017378 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| GWHPAAEP017379 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |