PlantSME Plant secondary metabolism enzyme database

Populus alba (populus_alba)

Imported from atlas release summary for Populus alba.

2170
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 692 19 BAHD (266) View species results
Phenylpropanoid pathway 473 13 POD (196) View species results
Alkaloid pathway 429 25 NMT (73) View species results
Flavonoid pathway 260 14 UFGT (135) View species results
Rosmarinic acid pathway 159 7 4CL (54) View species results
Steroid pathway 157 13 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1752 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 431 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
GWHPAAEP002564 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP002586 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP011272 Alkaloid NCS medium pass NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP011954 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP014553 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP017316 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP026219 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP026594 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP027871 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP028541 Alkaloid NCS low borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP031417 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP032815 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP035932 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP035933 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP035934 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP036115 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP036119 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GWHPAAEP036205 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP040738 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
GWHPAAEP040739 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
GWHPAAEP040742 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP041140 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP041379 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GWHPAAEP041549 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA