PlantSME Plant secondary metabolism enzyme database

Populus alba (populus_alba)

Imported from atlas release summary for Populus alba.

2170
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.89% Phenylpropanoid pathway 21.8% Alkaloid pathway 19.77% Flavonoid pathway 11.98% Rosmarinic acid pathway 7.33% Steroid pathway 7.24%
Family Distribution
C4H 6.65% BAHD 6.63% UGT 4.68% 4CL 4.2% C3'H/CYP98A 4.02% POD 3.95% 7DLGT 3.76% CYP76 3.35%
Other Families 62.77%
More Families (96)
F3H 167 3.2% IFS 163 3.12% UFGT 154 2.95% NMT 133 2.55% T3O 111 2.13% H6H 97 1.86% DWF4/CYP90B1 97 1.86% CAD 93 1.78% SMT1/SMT2/SMT3 86 1.65% FNS 85 1.63% CODM/T6ODM 83 1.59% G8O/G8H 83 1.59% STR 77 1.48% F3'H/CYP75B 76 1.46% IFR 72 1.38% LAC 71 1.36% CAS 66 1.26% BR6OX2/CYP85A2 60 1.15% T16H 58 1.11% GES 53 1.02% CSE 52 1.0% HCT 51 0.98% TPS 51 0.98% CYP71 49 0.94% PYKS 48 0.92% F5H/CYP84A 48 0.92% TAT 47 0.9% ANR 44 0.84% COMT 42 0.8% IO 41 0.79% CYP90D1 41 0.79% GS 40 0.77% SLS 40 0.77% F3'5'H/CYP75A 40 0.77% TRI/TRII 36 0.69% 16OMT 34 0.65% CCR 34 0.65% RAS 34 0.65% DFR 32 0.61% 8HGO 27 0.52% 7DLH 24 0.46% NCS 24 0.46% SGD 24 0.46% SQE 24 0.46% LAMT 23 0.44% BR6OX1/CYP85A1 23 0.44% CPD/CYP90A1 22 0.42% ISY 21 0.4% CNMT 21 0.4% CHS 20 0.38% ANS/LDOX 19 0.36% PMT 17 0.33% COR 16 0.31% MPO 15 0.29% ROT3/CYP90C1 15 0.29% CYP80B1 14 0.27% CPR 14 0.27% DET2 14 0.27% SQS/FDFT1 14 0.27% HPPR 13 0.25% GGPPS 13 0.25% AACT 12 0.23% FPPS 11 0.21% TYDC_DDC 9 0.17% CYP719 9 0.17% PAL 9 0.17% SMO1/SMO2 9 0.17% MVK 9 0.17% CCoAOMT 8 0.15% DXS 8 0.15% MVD 8 0.15% TDC 6 0.11% HMGR 6 0.11% ADC 5 0.1% CHI 5 0.1% MCT/IspD 5 0.1% CMK/IspE 5 0.1% DXR 4 0.08% IDI 4 0.08% BBE 3 0.06% CYP80F1 3 0.06% DWF5 3 0.06% DWF1 3 0.06% CYP51G1 3 0.06% DWF7 3 0.06% HDR/IspH 3 0.06% XMT_MXMT_DXMT 2 0.04% ODC 2 0.04% HYD1 2 0.04% PMK 2 0.04% HMGS 2 0.04% MDS/IspF 2 0.04% HDS/IspG 2 0.04% 6OMT_4OMT_SOMT 1 0.02% CPI1 1 0.02% FK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 692 19 BAHD (266) View species results
Phenylpropanoid pathway 473 13 POD (196) View species results
Alkaloid pathway 429 25 NMT (73) View species results
Flavonoid pathway 260 14 UFGT (135) View species results
Rosmarinic acid pathway 159 7 4CL (54) View species results
Steroid pathway 157 13 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1752 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 431 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
GWHPAAEP022117 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
GWHPAAEP022118 Terpenoid BAHD medium pass BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
GWHPAAEP022121 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
GWHPAAEP022203 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
GWHPAAEP022204 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
GWHPAAEP022205 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
GWHPAAEP022394 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
GWHPAAEP022479 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAAEP022548 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
GWHPAAEP022607 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
GWHPAAEP022840 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
GWHPAAEP023109 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
GWHPAAEP023175 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
GWHPAAEP023177 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
GWHPAAEP023178 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
GWHPAAEP023213 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
GWHPAAEP023326 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
GWHPAAEP023757 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
GWHPAAEP023765 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
GWHPAAEP023820 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
GWHPAAEP024026 Terpenoid BAHD low borderline BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
GWHPAAEP024032 Terpenoid BAHD low borderline BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
GWHPAAEP024271 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
GWHPAAEP024272 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
GWHPAAEP024351 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
GWHPAAEP024412 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
GWHPAAEP024659 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
GWHPAAEP024739 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
GWHPAAEP024740 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
GWHPAAEP024741 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
GWHPAAEP024759 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
GWHPAAEP024760 Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
GWHPAAEP024761 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
GWHPAAEP024762 Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
GWHPAAEP025111 Terpenoid BAHD low borderline BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
GWHPAAEP025242 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
GWHPAAEP025324 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
GWHPAAEP025382 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
GWHPAAEP025534 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
GWHPAAEP025697 Terpenoid BAHD medium pass BAHD__00033__sp_P0DXG0_AT_STRYX
GWHPAAEP025698 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
GWHPAAEP025699 Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
GWHPAAEP025700 Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
GWHPAAEP026226 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
GWHPAAEP026344 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
GWHPAAEP026418 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
GWHPAAEP026493 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAAEP026596 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
GWHPAAEP026597 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
GWHPAAEP026598 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH