PlantSME Plant secondary metabolism enzyme database

Populus alba (populus_alba)

Imported from atlas release summary for Populus alba.

2170
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 692 19 BAHD (266) View species results
Phenylpropanoid pathway 473 13 POD (196) View species results
Alkaloid pathway 429 25 NMT (73) View species results
Flavonoid pathway 260 14 UFGT (135) View species results
Rosmarinic acid pathway 159 7 4CL (54) View species results
Steroid pathway 157 13 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1752 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 431 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
GWHPAAEP035919 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
GWHPAAEP036050 Alkaloid NMT low borderline NMT__00033__sp_Q5QD03_SUVH3_CHLRE
GWHPAAEP036331 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
GWHPAAEP036332 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
GWHPAAEP036333 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
GWHPAAEP036334 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
GWHPAAEP036629 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
GWHPAAEP036901 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
GWHPAAEP037636 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
GWHPAAEP037679 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
GWHPAAEP037931 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
GWHPAAEP037932 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
GWHPAAEP038639 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
GWHPAAEP038640 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
GWHPAAEP038641 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
GWHPAAEP038642 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
GWHPAAEP038643 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
GWHPAAEP039144 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
GWHPAAEP039999 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
GWHPAAEP040000 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
GWHPAAEP040594 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
GWHPAAEP040675 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
GWHPAAEP040849 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
GWHPAAEP040850 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
GWHPAAEP041054 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
GWHPAAEP042511 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
GWHPAAEP042512 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
GWHPAAEP042553 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
GWHPAAEP042554 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
GWHPAAEP042555 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
GWHPAAEP043746 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
GWHPAAEP043747 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
GWHPAAEP044784 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH