Populus alba (populus_alba)
Imported from atlas release summary for Populus alba.
2170
Family-Level Assignments
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2170
Family-Level Assignments
C4H
6.65%
BAHD
6.63%
UGT
4.68%
4CL
4.2%
C3'H/CYP98A
4.02%
POD
3.95%
7DLGT
3.76%
CYP76
3.35%
Other Families
62.77%
More Families (96)
F3H
167
3.2%
IFS
163
3.12%
UFGT
154
2.95%
NMT
133
2.55%
T3O
111
2.13%
H6H
97
1.86%
DWF4/CYP90B1
97
1.86%
CAD
93
1.78%
SMT1/SMT2/SMT3
86
1.65%
FNS
85
1.63%
CODM/T6ODM
83
1.59%
G8O/G8H
83
1.59%
STR
77
1.48%
F3'H/CYP75B
76
1.46%
IFR
72
1.38%
LAC
71
1.36%
CAS
66
1.26%
BR6OX2/CYP85A2
60
1.15%
T16H
58
1.11%
GES
53
1.02%
CSE
52
1.0%
HCT
51
0.98%
TPS
51
0.98%
CYP71
49
0.94%
PYKS
48
0.92%
F5H/CYP84A
48
0.92%
TAT
47
0.9%
ANR
44
0.84%
COMT
42
0.8%
IO
41
0.79%
CYP90D1
41
0.79%
GS
40
0.77%
SLS
40
0.77%
F3'5'H/CYP75A
40
0.77%
TRI/TRII
36
0.69%
16OMT
34
0.65%
CCR
34
0.65%
RAS
34
0.65%
DFR
32
0.61%
8HGO
27
0.52%
7DLH
24
0.46%
NCS
24
0.46%
SGD
24
0.46%
SQE
24
0.46%
LAMT
23
0.44%
BR6OX1/CYP85A1
23
0.44%
CPD/CYP90A1
22
0.42%
ISY
21
0.4%
CNMT
21
0.4%
CHS
20
0.38%
ANS/LDOX
19
0.36%
PMT
17
0.33%
COR
16
0.31%
MPO
15
0.29%
ROT3/CYP90C1
15
0.29%
CYP80B1
14
0.27%
CPR
14
0.27%
DET2
14
0.27%
SQS/FDFT1
14
0.27%
HPPR
13
0.25%
GGPPS
13
0.25%
AACT
12
0.23%
FPPS
11
0.21%
TYDC_DDC
9
0.17%
CYP719
9
0.17%
PAL
9
0.17%
SMO1/SMO2
9
0.17%
MVK
9
0.17%
CCoAOMT
8
0.15%
DXS
8
0.15%
MVD
8
0.15%
TDC
6
0.11%
HMGR
6
0.11%
ADC
5
0.1%
CHI
5
0.1%
MCT/IspD
5
0.1%
CMK/IspE
5
0.1%
DXR
4
0.08%
IDI
4
0.08%
BBE
3
0.06%
CYP80F1
3
0.06%
DWF5
3
0.06%
DWF1
3
0.06%
CYP51G1
3
0.06%
DWF7
3
0.06%
HDR/IspH
3
0.06%
XMT_MXMT_DXMT
2
0.04%
ODC
2
0.04%
HYD1
2
0.04%
PMK
2
0.04%
HMGS
2
0.04%
MDS/IspF
2
0.04%
HDS/IspG
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Family-Level Assignments | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 692 | 19 | BAHD (266) | View species results |
| Phenylpropanoid pathway | 473 | 13 | POD (196) | View species results |
| Alkaloid pathway | 429 | 25 | NMT (73) | View species results |
| Flavonoid pathway | 260 | 14 | UFGT (135) | View species results |
| Rosmarinic acid pathway | 159 | 7 | 4CL (54) | View species results |
| Steroid pathway | 157 | 13 | CAS (60) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Family-level assignments | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1752 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 431 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| GWHPAAEP000198 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP000199 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP000446 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP000447 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP000790 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP001482 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP002402 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP003146 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAAEP003148 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAAEP003166 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP003981 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP004408 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP005623 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP006658 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| GWHPAAEP006909 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP006910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP007044 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP007045 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP007046 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP007767 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP008405 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAAEP008407 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| GWHPAAEP008408 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAAEP009744 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP009745 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP010473 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP011051 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP011052 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP012063 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP012064 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP014037 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP015042 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP015147 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP017031 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP017936 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP018865 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP020348 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAAEP021808 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP021811 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP021942 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP022284 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP022685 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP022832 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP023394 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAAEP023837 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP024789 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAAEP024790 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAAEP024877 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP024975 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAAEP025314 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |