PlantSME Plant secondary metabolism enzyme database

Populus trichocarpa (populus_trichocarpa)

Imported from atlas release summary for Populus trichocarpa.

2612
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 743 19 BAHD (276) View species results
Alkaloid pathway 615 20 7DLGT (125) View species results
Phenylpropanoid pathway 524 11 POD (217) View species results
Flavonoid pathway 344 10 UFGT (232) View species results
Rosmarinic acid pathway 213 7 C4H (81) View species results
Steroid pathway 173 13 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2251 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 456 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
Potri.004G172700.2.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.004G179300.1.p Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
Potri.004G214100.3.p Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Potri.005G008050.1.p Terpenoid UGT medium pass UGT__00077__sp_Q8VZE9_U73B1_ARATH
Potri.005G010016.1.p Terpenoid UGT medium pass UGT__00077__sp_Q8VZE9_U73B1_ARATH
Potri.005G036100.1.p Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
Potri.005G073766.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.005G073800.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.006G007000.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.006G007100.2.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.006G007200.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.006G007200.2.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.006G007200.3.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.006G007300.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.006G007350.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.006G007400.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.006G007602.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.006G009900.1.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.006G010000.1.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.006G010000.2.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.006G022300.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Potri.006G022500.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Potri.006G022600.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Potri.006G022850.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Potri.006G023101.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Potri.006G023151.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Potri.006G023151.2.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.006G023600.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.006G023700.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.006G039300.1.p Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Potri.006G039300.2.p Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Potri.006G047200.1.p Terpenoid UGT medium pass UGT__00080__sp_Q94AB5_U7E12_ARATH
Potri.006G048200.1.p Terpenoid UGT medium pass UGT__00080__sp_Q94AB5_U7E12_ARATH
Potri.006G055600.1.p Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
Potri.006G103850.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Potri.006G120600.1.p Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
Potri.006G171100.1.p Terpenoid UGT medium pass UGT__00086__sp_Q9LFJ8_U78D2_ARATH
Potri.006G171128.1.p Terpenoid UGT medium pass UGT__00086__sp_Q9LFJ8_U78D2_ARATH
Potri.006G171156.1.p Terpenoid UGT medium pass UGT__00086__sp_Q9LFJ8_U78D2_ARATH
Potri.006G171268.1.p Terpenoid UGT medium pass UGT__00086__sp_Q9LFJ8_U78D2_ARATH
Potri.006G179700.1.p Terpenoid UGT medium pass UGT__00037__sp_I1LCI8_FG2KO_SOYBN
Potri.006G272500.1.p Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
Potri.006G272600.1.p Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
Potri.007G029800.1.p Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Potri.007G030300.1.p Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Potri.007G030300.2.p Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Potri.007G030400.1.p Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Potri.007G030500.1.p Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Potri.007G049600.1.p Terpenoid UGT medium pass UGT__00048__sp_O22182_U84B1_ARATH
Potri.007G095000.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA