PlantSME Plant secondary metabolism enzyme database

Populus trichocarpa (populus_trichocarpa)

Imported from atlas release summary for Populus trichocarpa.

2612
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 743 19 BAHD (276) View species results
Alkaloid pathway 615 20 7DLGT (125) View species results
Phenylpropanoid pathway 524 11 POD (217) View species results
Flavonoid pathway 344 10 UFGT (232) View species results
Rosmarinic acid pathway 213 7 C4H (81) View species results
Steroid pathway 173 13 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2251 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 456 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
Potri.014G026301.1.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.014G041800.1.p Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Potri.014G041900.1.p Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Potri.014G088400.2.p Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Potri.014G088400.5.p Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Potri.014G088400.6.p Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Potri.014G096000.1.p Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Potri.014G096100.1.p Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Potri.014G146000.2.p Terpenoid UGT medium pass UGT__00021__sp_A7MAS5_75L17_MALDO
Potri.014G175000.1.p Terpenoid UGT medium pass UGT__00071__sp_Q6VAA6_U74G1_STERE
Potri.015G027700.1.p Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
Potri.015G027700.2.p Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
Potri.015G027800.1.p Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
Potri.015G071900.1.p Terpenoid UGT medium pass UGT__00055__sp_O48676_U74B1_ARATH
Potri.016G014100.1.p Terpenoid UGT medium pass UGT__00029__sp_D3UAG2_U71K2_PYRCO
Potri.016G014300.1.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.016G014350.1.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.016G014401.2.p Terpenoid UGT medium pass UGT__00029__sp_D3UAG2_U71K2_PYRCO
Potri.016G014401.3.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.016G014500.1.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.016G015700.1.p Terpenoid UGT medium pass UGT__00061__sp_P0DO49_U71K3_FRAAN
Potri.016G015800.1.p Terpenoid UGT medium pass UGT__00027__sp_D3UAG0_U71K1_MALDO
Potri.016G016000.2.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.016G016000.3.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.016G016100.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G016200.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.016G016300.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G016400.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.016G016500.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G016601.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G016700.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.016G016800.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.016G016800.2.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G016800.3.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G016900.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.016G017002.1.p Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
Potri.016G017100.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G017166.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G017232.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G017300.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G017400.1.p Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
Potri.016G018001.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.016G019400.1.p Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
Potri.016G020201.1.p Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Potri.016G020400.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.016G020500.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.016G020700.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.016G020800.3.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.016G020900.1.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Potri.016G021000.3.p Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO