PlantSME Plant secondary metabolism enzyme database

Populus trichocarpa (populus_trichocarpa)

Imported from atlas release summary for Populus trichocarpa.

3008
Candidate Protein Records
2612
Pathway-Level Records
6120
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 743 19 BAHD (276) View species results
Alkaloid pathway 615 20 7DLGT (125) View species results
Phenylpropanoid pathway 524 11 POD (217) View species results
Flavonoid pathway 344 10 UFGT (232) View species results
Rosmarinic acid pathway 213 7 C4H (81) View species results
Steroid pathway 173 13 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2251 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 456 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
Potri.015G125201.1.p Terpenoid MVK medium pass MVK__00001__sp_P46086_KIME_ARATH
Potri.001G135500.2.p Terpenoid PMK medium pass PMK__00001__sp_Q9C6T1_PMK_ARATH
Potri.003G098100.3.p Terpenoid PMK high pass PMK__00001__sp_Q9C6T1_PMK_ARATH
Potri.003G098100.4.p Terpenoid PMK high pass PMK__00001__sp_Q9C6T1_PMK_ARATH
Potri.001G308200.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.001G308300.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.002G052100.2.p Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
Potri.004G030200.1.p Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
Potri.004G030400.1.p Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
Potri.004G037900.1.p Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Potri.005G095500.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
Potri.005G210300.2.p Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
Potri.007G074400.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.007G074466.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.007G118600.1.p Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
Potri.007G119700.3.p Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
Potri.007G119700.4.p Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
Potri.008G082400.1.p Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Potri.008G082700.1.p Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Potri.008G082700.2.p Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Potri.011G031800.2.p Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
Potri.011G032300.2.p Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
Potri.011G130666.1.p Terpenoid TPS medium pass TPS__00115__sp_G5CV52_TPS17_SOLLC
Potri.011G142800.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
Potri.015G032100.3.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
Potri.015G085500.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
Potri.015G085500.2.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
Potri.017G041700.7.p Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
Potri.019G016116.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.019G016118.1.p Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
Potri.019G016122.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.019G016400.2.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.019G016500.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.019G016700.2.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.019G016900.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.019G020367.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.019G022338.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023000.2.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023002.1.p Terpenoid TPS medium pass TPS__00005__sp_A0A140KFG9_TPS1_CAMBE
Potri.019G023004.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Potri.019G023006.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023006.2.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023008.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023008.2.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023014.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023014.2.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023014.3.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023014.4.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023014.5.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Potri.019G023016.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO