PlantSME Plant secondary metabolism enzyme database

Populus trichocarpa (populus_trichocarpa)

Imported from atlas release summary for Populus trichocarpa.

3008
Candidate Protein Records
2612
Pathway-Level Records
6120
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 743 19 BAHD (276) View species results
Alkaloid pathway 615 20 7DLGT (125) View species results
Phenylpropanoid pathway 524 11 POD (217) View species results
Flavonoid pathway 344 10 UFGT (232) View species results
Rosmarinic acid pathway 213 7 C4H (81) View species results
Steroid pathway 173 13 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2251 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 456 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Potri.010G220100.1.p Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Potri.010G220200.2.p Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Potri.010G226100.11.p Terpenoid BAHD medium pass BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Potri.010G226100.4.p Terpenoid BAHD medium pass BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Potri.010G227700.1.p Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Potri.010G227700.2.p Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Potri.010G227700.3.p Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Potri.010G227700.4.p Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Potri.011G046600.1.p Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Potri.011G124128.1.p Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Potri.011G124156.1.p Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Potri.011G124184.1.p Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Potri.011G124268.1.p Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Potri.011G124300.1.p Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Potri.011G124500.1.p Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Potri.011G138900.2.p Terpenoid BAHD low borderline BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Potri.011G145900.1.p Terpenoid BAHD medium pass BAHD__00011__sp_A1A442_DGAT2_RICCO
Potri.011G145900.5.p Terpenoid BAHD medium pass BAHD__00011__sp_A1A442_DGAT2_RICCO
Potri.011G146800.2.p Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Potri.011G146800.5.p Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Potri.011G153500.1.p Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Potri.012G014200.1.p Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Potri.012G103300.1.p Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Potri.012G105500.1.p Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Potri.012G121596.1.p Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
Potri.012G144500.1.p Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Potri.012G144500.4.p Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Potri.013G074300.1.p Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Potri.013G074400.1.p Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Potri.013G074500.1.p Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Potri.013G085101.2.p Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
Potri.013G085101.3.p Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
Potri.013G085101.4.p Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
Potri.013G085101.5.p Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
Potri.013G097500.1.p Terpenoid BAHD medium pass BAHD__00044__sp_Q56WD9_THIK2_ARATH
Potri.013G112100.1.p Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Potri.013G124750.1.p Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Potri.013G124900.2.p Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Potri.014G025500.1.p Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.014G025550.1.p Terpenoid BAHD low borderline BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Potri.014G025600.1.p Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.014G040600.1.p Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Potri.014G042200.1.p Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Potri.014G042200.2.p Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Potri.014G069200.1.p Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Potri.014G074300.1.p Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Potri.014G085500.1.p Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Potri.014G104000.4.p Terpenoid BAHD medium pass BAHD__00048__sp_Q5M757_ZDH15_ARATH
Potri.014G112000.1.p Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
Potri.014G113600.1.p Terpenoid BAHD medium pass BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC