Prasinoderma coloniale (prasinoderma_coloniale)
Imported from atlas release summary for Prasinoderma coloniale.
88
Candidate Genes
79
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
88
Candidate Genes
BAHD
9.18%
4CL
8.54%
NMT
6.96%
IFR
5.38%
STR
4.43%
CYP71
4.11%
C3'H/CYP98A
3.8%
POD
3.48%
Other Families
54.11%
More Families (71)
C4H
9
2.85%
CNMT
8
2.53%
SMT1/SMT2/SMT3
7
2.22%
CYP76
7
2.22%
TRI/TRII
6
1.9%
CAS
6
1.9%
T3O
5
1.58%
FNS
5
1.58%
IFS
5
1.58%
CPR
5
1.58%
CPD/CYP90A1
5
1.58%
COR
4
1.27%
GS
4
1.27%
H6H
4
1.27%
PMT
4
1.27%
F3H
4
1.27%
CAD
4
1.27%
CSE
4
1.27%
DWF4/CYP90B1
4
1.27%
SQS/FDFT1
3
0.95%
AACT
3
0.95%
FPPS
3
0.95%
GGPPS
3
0.95%
ODC
2
0.63%
G8O/G8H
2
0.63%
IO
2
0.63%
ANR
2
0.63%
F3'H/CYP75B
2
0.63%
DFR
2
0.63%
CCR
2
0.63%
TAT
2
0.63%
CYP90D1
2
0.63%
BR6OX2/CYP85A2
2
0.63%
DWF1
2
0.63%
PYKS
1
0.32%
7DLH
1
0.32%
ADC
1
0.32%
CODM/T6ODM
1
0.32%
MPO
1
0.32%
TYDC_DDC
1
0.32%
LAMT
1
0.32%
8HGO
1
0.32%
BBE
1
0.32%
T16H
1
0.32%
CYP80B1
1
0.32%
CYP719
1
0.32%
TDC
1
0.32%
SLS
1
0.32%
ANS/LDOX
1
0.32%
UFGT
1
0.32%
F3'5'H/CYP75A
1
0.32%
LAC
1
0.32%
CCoAOMT
1
0.32%
FK
1
0.32%
DWF5
1
0.32%
DWF7
1
0.32%
DET2
1
0.32%
CYP51G1
1
0.32%
BR6OX1/CYP85A1
1
0.32%
HYD1
1
0.32%
CPI1
1
0.32%
MDS/IspF
1
0.32%
IDI
1
0.32%
DXR
1
0.32%
HDS/IspG
1
0.32%
UGT
1
0.32%
CMK/IspE
1
0.32%
MCT/IspD
1
0.32%
DXS
1
0.32%
HDR/IspH
1
0.32%
MVK
1
0.32%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 35 | 12 | BAHD (14) | View species results |
| Alkaloid pathway | 25 | 11 | NMT (7) | View species results |
| Steroid pathway | 12 | 7 | CAS (6) | View species results |
| Phenylpropanoid pathway | 11 | 3 | POD (8) | View species results |
| Rosmarinic acid pathway | 4 | 2 | CPR (3) | View species results |
| Flavonoid pathway | 1 | 1 | IFR (1) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 21 | 78 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, G8O/G8H, IFS, IO, SLS, T16H, T3O |
| BAHD/acyltransferase | 1 | 29 | BAHD |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pcol01G0000330.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Pcol07G0001000.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| Pcol09G0002870.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| Pcol13G0002490.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Pcol14G0001310.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Pcol15G0000710.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |