PlantSME Plant secondary metabolism enzyme database

Prunus ferganensis (prunus_ferganensis)

Imported from atlas release summary for Prunus ferganensis.

1551
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.95% Alkaloid pathway 24.89% Phenylpropanoid pathway 19.79% Flavonoid pathway 13.86% Rosmarinic acid pathway 7.93% Steroid pathway 4.58%
Family Distribution
C4H 6.21% C3'H/CYP98A 5.71% UGT 5.47% BAHD 4.95% 7DLGT 4.34% UFGT 4.2% CYP76 4.18% IFS 3.54%
Other Families 61.4%
More Families (96)
4CL 117 3.21% T3O 112 3.08% F3H 112 3.08% POD 112 3.08% DWF4/CYP90B1 85 2.34% CAD 79 2.17% F3'H/CYP75B 69 1.9% GS 66 1.81% NMT 64 1.76% H6H 63 1.73% CODM/T6ODM 62 1.7% BR6OX2/CYP85A2 61 1.68% SGD 54 1.48% STR 52 1.43% BBE 43 1.18% TRI/TRII 40 1.1% LAC 39 1.07% CSE 38 1.04% TPS 38 1.04% GES 35 0.96% CAS 35 0.96% T16H 34 0.93% IFR 34 0.93% SMT1/SMT2/SMT3 34 0.93% IO 33 0.91% PYKS 32 0.88% RAS 31 0.85% NCS 30 0.82% 7DLH 30 0.82% CYP90D1 30 0.82% HCT 28 0.77% CYP71 28 0.77% PMT 27 0.74% G8O/G8H 26 0.71% COMT 25 0.69% F3'5'H/CYP75A 24 0.66% ANR 23 0.63% BR6OX1/CYP85A1 22 0.6% SLS 21 0.58% FNS 21 0.58% CCR 18 0.49% COR 17 0.47% 16OMT 16 0.44% F5H/CYP84A 16 0.44% LAMT 14 0.38% TAT 13 0.36% ROT3/CYP90C1 13 0.36% 8HGO 12 0.33% ANS/LDOX 12 0.33% CPD/CYP90A1 12 0.33% ISY 11 0.3% CHS 10 0.27% HPPR 10 0.27% CCoAOMT 9 0.25% CYP51G1 9 0.25% AACT 8 0.22% MPO 7 0.19% CNMT 7 0.19% DFR 7 0.19% FPPS 7 0.19% TYDC_DDC 6 0.16% PAL 6 0.16% CPR 5 0.14% SQE 5 0.14% SQS/FDFT1 5 0.14% GGPPS 5 0.14% 6OMT_4OMT_SOMT 4 0.11% CHI 4 0.11% SMO1/SMO2 4 0.11% MVK 4 0.11% CYP719 3 0.08% TDC 3 0.08% ODC 3 0.08% FLS 3 0.08% DET2 3 0.08% DXS 3 0.08% MCT/IspD 3 0.08% MVD 3 0.08% HDR/IspH 3 0.08% HMGR 3 0.08% CYP80B1 2 0.05% FK 2 0.05% HDS/IspG 2 0.05% DXR 2 0.05% XMT_MXMT_DXMT 1 0.03% ADC 1 0.03% HYD1 1 0.03% DWF1 1 0.03% DWF5 1 0.03% DWF7 1 0.03% CPI1 1 0.03% CMK/IspE 1 0.03% PMK 1 0.03% HMGS 1 0.03% MDS/IspF 1 0.03% IDI 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 449 19 UGT (186) View species results
Alkaloid pathway 386 23 7DLGT (87) View species results
Phenylpropanoid pathway 307 11 POD (106) View species results
Flavonoid pathway 215 11 UFGT (144) View species results
Rosmarinic acid pathway 123 7 C4H (50) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1345 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 239 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status Best Target
prunus_ferganensis_Pfe01g1142 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe01g3800 Flavonoid ANS/LDOX low borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe01g5660 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
prunus_ferganensis_Pfe03g0065 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe04g1446 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe06g2819 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe06g2820 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe06g2821 Flavonoid ANS/LDOX low borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe08g0124 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00003__sp_O04274_LDOX_PERFR
prunus_ferganensis_Pfe08g1366 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe08g1371 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
prunus_ferganensis_Pfe08g2459 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH