Prunus ferganensis (prunus_ferganensis)
Imported from atlas release summary for Prunus ferganensis.
1551
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1551
Candidate Genes
C4H
6.21%
C3'H/CYP98A
5.71%
UGT
5.47%
BAHD
4.95%
7DLGT
4.34%
UFGT
4.2%
CYP76
4.18%
IFS
3.54%
Other Families
61.4%
More Families (96)
4CL
117
3.21%
T3O
112
3.08%
F3H
112
3.08%
POD
112
3.08%
DWF4/CYP90B1
85
2.34%
CAD
79
2.17%
F3'H/CYP75B
69
1.9%
GS
66
1.81%
NMT
64
1.76%
H6H
63
1.73%
CODM/T6ODM
62
1.7%
BR6OX2/CYP85A2
61
1.68%
SGD
54
1.48%
STR
52
1.43%
BBE
43
1.18%
TRI/TRII
40
1.1%
LAC
39
1.07%
CSE
38
1.04%
TPS
38
1.04%
GES
35
0.96%
CAS
35
0.96%
T16H
34
0.93%
IFR
34
0.93%
SMT1/SMT2/SMT3
34
0.93%
IO
33
0.91%
PYKS
32
0.88%
RAS
31
0.85%
NCS
30
0.82%
7DLH
30
0.82%
CYP90D1
30
0.82%
HCT
28
0.77%
CYP71
28
0.77%
PMT
27
0.74%
G8O/G8H
26
0.71%
COMT
25
0.69%
F3'5'H/CYP75A
24
0.66%
ANR
23
0.63%
BR6OX1/CYP85A1
22
0.6%
SLS
21
0.58%
FNS
21
0.58%
CCR
18
0.49%
COR
17
0.47%
16OMT
16
0.44%
F5H/CYP84A
16
0.44%
LAMT
14
0.38%
TAT
13
0.36%
ROT3/CYP90C1
13
0.36%
8HGO
12
0.33%
ANS/LDOX
12
0.33%
CPD/CYP90A1
12
0.33%
ISY
11
0.3%
CHS
10
0.27%
HPPR
10
0.27%
CCoAOMT
9
0.25%
CYP51G1
9
0.25%
AACT
8
0.22%
MPO
7
0.19%
CNMT
7
0.19%
DFR
7
0.19%
FPPS
7
0.19%
TYDC_DDC
6
0.16%
PAL
6
0.16%
CPR
5
0.14%
SQE
5
0.14%
SQS/FDFT1
5
0.14%
GGPPS
5
0.14%
6OMT_4OMT_SOMT
4
0.11%
CHI
4
0.11%
SMO1/SMO2
4
0.11%
MVK
4
0.11%
CYP719
3
0.08%
TDC
3
0.08%
ODC
3
0.08%
FLS
3
0.08%
DET2
3
0.08%
DXS
3
0.08%
MCT/IspD
3
0.08%
MVD
3
0.08%
HDR/IspH
3
0.08%
HMGR
3
0.08%
CYP80B1
2
0.05%
FK
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
XMT_MXMT_DXMT
1
0.03%
ADC
1
0.03%
HYD1
1
0.03%
DWF1
1
0.03%
DWF5
1
0.03%
DWF7
1
0.03%
CPI1
1
0.03%
CMK/IspE
1
0.03%
PMK
1
0.03%
HMGS
1
0.03%
MDS/IspF
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 449 | 19 | UGT (186) | View species results |
| Alkaloid pathway | 386 | 23 | 7DLGT (87) | View species results |
| Phenylpropanoid pathway | 307 | 11 | POD (106) | View species results |
| Flavonoid pathway | 215 | 11 | UFGT (144) | View species results |
| Rosmarinic acid pathway | 123 | 7 | C4H (50) | View species results |
| Steroid pathway | 71 | 12 | CAS (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1345 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 239 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| prunus_ferganensis_Pfe01g2784 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_ferganensis_Pfe01g2791 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_ferganensis_Pfe01g2797 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_ferganensis_Pfe01g3748 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| prunus_ferganensis_Pfe01g3749 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_ferganensis_Pfe01g3791 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_ferganensis_Pfe02g0770 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_ferganensis_Pfe02g3124 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_ferganensis_Pfe05g2437 | Alkaloid | COR | low | borderline | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_ferganensis_Pfe06g0930 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_ferganensis_Pfe06g0931 | Alkaloid | COR | medium | pass | COR__00005__sp_Q9SQ70_COR11_PAPSO |
| prunus_ferganensis_Pfe06g2849 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| prunus_ferganensis_Pfe06g2850 | Alkaloid | COR | medium | pass | COR__00003__sp_Q9SQ68_COR13_PAPSO |
| prunus_ferganensis_Pfe06g2854 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_ferganensis_Pfe06g2855 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_ferganensis_Pfe06g2857 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_ferganensis_Pfe08g1014 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |