PlantSME Plant secondary metabolism enzyme database

Prunus ferganensis (prunus_ferganensis)

Imported from atlas release summary for Prunus ferganensis.

1551
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.95% Alkaloid pathway 24.89% Phenylpropanoid pathway 19.79% Flavonoid pathway 13.86% Rosmarinic acid pathway 7.93% Steroid pathway 4.58%
Family Distribution
C4H 6.21% C3'H/CYP98A 5.71% UGT 5.47% BAHD 4.95% 7DLGT 4.34% UFGT 4.2% CYP76 4.18% IFS 3.54%
Other Families 61.4%
More Families (96)
4CL 117 3.21% T3O 112 3.08% F3H 112 3.08% POD 112 3.08% DWF4/CYP90B1 85 2.34% CAD 79 2.17% F3'H/CYP75B 69 1.9% GS 66 1.81% NMT 64 1.76% H6H 63 1.73% CODM/T6ODM 62 1.7% BR6OX2/CYP85A2 61 1.68% SGD 54 1.48% STR 52 1.43% BBE 43 1.18% TRI/TRII 40 1.1% LAC 39 1.07% CSE 38 1.04% TPS 38 1.04% GES 35 0.96% CAS 35 0.96% T16H 34 0.93% IFR 34 0.93% SMT1/SMT2/SMT3 34 0.93% IO 33 0.91% PYKS 32 0.88% RAS 31 0.85% NCS 30 0.82% 7DLH 30 0.82% CYP90D1 30 0.82% HCT 28 0.77% CYP71 28 0.77% PMT 27 0.74% G8O/G8H 26 0.71% COMT 25 0.69% F3'5'H/CYP75A 24 0.66% ANR 23 0.63% BR6OX1/CYP85A1 22 0.6% SLS 21 0.58% FNS 21 0.58% CCR 18 0.49% COR 17 0.47% 16OMT 16 0.44% F5H/CYP84A 16 0.44% LAMT 14 0.38% TAT 13 0.36% ROT3/CYP90C1 13 0.36% 8HGO 12 0.33% ANS/LDOX 12 0.33% CPD/CYP90A1 12 0.33% ISY 11 0.3% CHS 10 0.27% HPPR 10 0.27% CCoAOMT 9 0.25% CYP51G1 9 0.25% AACT 8 0.22% MPO 7 0.19% CNMT 7 0.19% DFR 7 0.19% FPPS 7 0.19% TYDC_DDC 6 0.16% PAL 6 0.16% CPR 5 0.14% SQE 5 0.14% SQS/FDFT1 5 0.14% GGPPS 5 0.14% 6OMT_4OMT_SOMT 4 0.11% CHI 4 0.11% SMO1/SMO2 4 0.11% MVK 4 0.11% CYP719 3 0.08% TDC 3 0.08% ODC 3 0.08% FLS 3 0.08% DET2 3 0.08% DXS 3 0.08% MCT/IspD 3 0.08% MVD 3 0.08% HDR/IspH 3 0.08% HMGR 3 0.08% CYP80B1 2 0.05% FK 2 0.05% HDS/IspG 2 0.05% DXR 2 0.05% XMT_MXMT_DXMT 1 0.03% ADC 1 0.03% HYD1 1 0.03% DWF1 1 0.03% DWF5 1 0.03% DWF7 1 0.03% CPI1 1 0.03% CMK/IspE 1 0.03% PMK 1 0.03% HMGS 1 0.03% MDS/IspF 1 0.03% IDI 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 449 19 UGT (186) View species results
Alkaloid pathway 386 23 7DLGT (87) View species results
Phenylpropanoid pathway 307 11 POD (106) View species results
Flavonoid pathway 215 11 UFGT (144) View species results
Rosmarinic acid pathway 123 7 C4H (50) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1345 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 239 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
prunus_ferganensis_Pfe01g0520 Flavonoid IFR low borderline
prunus_ferganensis_Pfe01g1025 Flavonoid IFR low borderline
prunus_ferganensis_Pfe01g1344 Flavonoid IFR low borderline
prunus_ferganensis_Pfe01g1425 Flavonoid IFR low borderline
prunus_ferganensis_Pfe01g2170 Flavonoid IFR low borderline
prunus_ferganensis_Pfe01g3418 Flavonoid IFR high pass
prunus_ferganensis_Pfe01g4123 Flavonoid IFR high pass
prunus_ferganensis_Pfe01g4336 Flavonoid IFR low borderline
prunus_ferganensis_Pfe03g0280 Flavonoid IFR low borderline
prunus_ferganensis_Pfe03g3265 Flavonoid IFR low borderline
prunus_ferganensis_Pfe04g0635 Flavonoid IFR low borderline
prunus_ferganensis_Pfe04g0748 Flavonoid IFR low borderline
prunus_ferganensis_Pfe04g0749 Flavonoid IFR low borderline
prunus_ferganensis_Pfe04g2468 Flavonoid IFR high pass
prunus_ferganensis_Pfe04g2469 Flavonoid IFR high pass
prunus_ferganensis_Pfe04g2472 Flavonoid IFR high pass
prunus_ferganensis_Pfe04g2560 Flavonoid IFR low borderline
prunus_ferganensis_Pfe05g0253 Flavonoid IFR high pass
prunus_ferganensis_Pfe05g0255 Flavonoid IFR high pass
prunus_ferganensis_Pfe05g0256 Flavonoid IFR high pass
prunus_ferganensis_Pfe05g0257 Flavonoid IFR high pass
prunus_ferganensis_Pfe05g0302 Flavonoid IFR low borderline
prunus_ferganensis_Pfe05g2226 Flavonoid IFR high pass
prunus_ferganensis_Pfe06g2714 Flavonoid IFR low borderline
prunus_ferganensis_Pfe06g2806 Flavonoid IFR low borderline
prunus_ferganensis_Pfe06g3307 Flavonoid IFR low borderline
prunus_ferganensis_Pfe07g2595 Flavonoid IFR low borderline
prunus_ferganensis_Pfe08g1016 Flavonoid IFR low borderline
prunus_ferganensis_Pfe08g1142 Flavonoid IFR high pass
prunus_ferganensis_Pfe08g1144 Flavonoid IFR medium pass
prunus_ferganensis_Pfe08g1290 Flavonoid IFR low borderline
prunus_ferganensis_Pfe08g1975 Flavonoid IFR medium pass
prunus_ferganensis_Pfe08g2340 Flavonoid IFR low borderline
prunus_ferganensis_Pfe08g2798 Flavonoid IFR low borderline