Prunus mira (prunus_mira)
Imported from atlas release summary for Prunus mira.
1668
Candidate Protein Records
1462
Pathway-Level Records
3495
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3495
Family-Level Calls
C4H
6.52%
C3'H/CYP98A
5.92%
UGT
5.41%
BAHD
4.98%
7DLGT
4.49%
UFGT
4.38%
CYP76
4.18%
IFS
3.98%
Other Families
60.14%
More Families (97)
POD
122
3.49%
T3O
112
3.2%
4CL
111
3.18%
F3H
107
3.06%
DWF4/CYP90B1
85
2.43%
NMT
69
1.97%
H6H
68
1.95%
F3'H/CYP75B
67
1.92%
BR6OX2/CYP85A2
64
1.83%
CAD
59
1.69%
CODM/T6ODM
54
1.55%
STR
53
1.52%
GS
46
1.32%
SMT1/SMT2/SMT3
43
1.23%
BBE
40
1.14%
CSE
40
1.14%
TRI/TRII
38
1.09%
LAC
37
1.06%
CYP71
36
1.03%
SGD
35
1.0%
CYP90D1
34
0.97%
7DLH
33
0.94%
IFR
32
0.92%
CAS
32
0.92%
IO
31
0.89%
PYKS
29
0.83%
T16H
27
0.77%
HCT
27
0.77%
TPS
27
0.77%
ANR
26
0.74%
RAS
26
0.74%
GES
23
0.66%
BR6OX1/CYP85A1
23
0.66%
COMT
22
0.63%
PMT
21
0.6%
F3'5'H/CYP75A
21
0.6%
G8O/G8H
20
0.57%
LAMT
20
0.57%
NCS
19
0.54%
CCR
19
0.54%
SLS
17
0.49%
TAT
17
0.49%
COR
15
0.43%
16OMT
15
0.43%
FNS
14
0.4%
F5H/CYP84A
14
0.4%
ANS/LDOX
12
0.34%
8HGO
9
0.26%
CPD/CYP90A1
9
0.26%
CYP51G1
9
0.26%
ROT3/CYP90C1
9
0.26%
CHS
8
0.23%
CCoAOMT
8
0.23%
MPO
7
0.2%
CNMT
7
0.2%
ISY
7
0.2%
TYDC_DDC
7
0.2%
FPPS
7
0.2%
DFR
6
0.17%
PAL
6
0.17%
HPPR
6
0.17%
SQE
6
0.17%
SQS/FDFT1
6
0.17%
CYP719
5
0.14%
AACT
5
0.14%
GGPPS
5
0.14%
CHI
4
0.11%
CPR
4
0.11%
MVD
4
0.11%
HDR/IspH
4
0.11%
HMGR
4
0.11%
CYP80B1
3
0.09%
CYP80F1
3
0.09%
ODC
3
0.09%
FK
3
0.09%
DET2
3
0.09%
SMO1/SMO2
3
0.09%
MVK
3
0.09%
DXS
3
0.09%
TDC
2
0.06%
FLS
2
0.06%
HYD1
2
0.06%
HDS/IspG
2
0.06%
MCT/IspD
2
0.06%
DXR
2
0.06%
XMT_MXMT_DXMT
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
ADC
1
0.03%
DWF1
1
0.03%
DWF5
1
0.03%
DWF7
1
0.03%
CPI1
1
0.03%
CMK/IspE
1
0.03%
PMK
1
0.03%
HMGS
1
0.03%
MDS/IspF
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 433 | 19 | UGT (184) | View species results |
| Alkaloid pathway | 331 | 22 | 7DLGT (83) | View species results |
| Phenylpropanoid pathway | 301 | 11 | POD (115) | View species results |
| Flavonoid pathway | 205 | 11 | UFGT (147) | View species results |
| Rosmarinic acid pathway | 116 | 7 | C4H (54) | View species results |
| Steroid pathway | 76 | 12 | SMT1/SMT2/SMT3 (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1342 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 227 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| prunus_mira_Pmi01g4388 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g4542 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi01g4544 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi01g4556 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g4557 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g4558 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g4626 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5240 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5241 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5660 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5678 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5682 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5684 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5685 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5686 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g5691 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi01g6086 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi01g6087 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi01g6088 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi01g6089 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi02g0081 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi02g0086 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g0166 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi02g0881 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g0892 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi02g1028 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1302 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1303 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1314 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1317 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1412 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1413 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1418 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1734 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1735 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1737 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1738 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1739 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g1909 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g2100 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g2146 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g3087 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g3092 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g3093 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi02g3094 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi03g0376 | Rosmarinic Acid | C4H | medium | pass |
| prunus_mira_Pmi03g0491 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi03g0629 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi03g0653 | Rosmarinic Acid | C4H | low | borderline |
| prunus_mira_Pmi03g2066 | Rosmarinic Acid | C4H | medium | pass |