Prunus mira (prunus_mira)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.62% Alkaloid pathway 22.64% Phenylpropanoid pathway 20.59% Flavonoid pathway 14.02% Rosmarinic acid pathway 7.93% Steroid pathway 5.2%

Family Distribution

1462 Candidate Genes

C4H 6.52% C3'H/CYP98A 5.92% UGT 5.41% BAHD 4.98% 7DLGT 4.49% UFGT 4.38% CYP76 4.18% IFS 3.98%

Other Families 60.14%

More Families (97)

POD 122 3.49% T3O 112 3.2% 4CL 111 3.18% F3H 107 3.06% DWF4/CYP90B1 85 2.43% NMT 69 1.97% H6H 68 1.95% F3'H/CYP75B 67 1.92% BR6OX2/CYP85A2 64 1.83% CAD 59 1.69% CODM/T6ODM 54 1.55% STR 53 1.52% GS 46 1.32% SMT1/SMT2/SMT3 43 1.23% BBE 40 1.14% CSE 40 1.14% TRI/TRII 38 1.09% LAC 37 1.06% CYP71 36 1.03% SGD 35 1.0% CYP90D1 34 0.97% 7DLH 33 0.94% IFR 32 0.92% CAS 32 0.92% IO 31 0.89% PYKS 29 0.83% T16H 27 0.77% HCT 27 0.77% TPS 27 0.77% ANR 26 0.74% RAS 26 0.74% GES 23 0.66% BR6OX1/CYP85A1 23 0.66% COMT 22 0.63% PMT 21 0.6% F3'5'H/CYP75A 21 0.6% G8O/G8H 20 0.57% LAMT 20 0.57% NCS 19 0.54% CCR 19 0.54% SLS 17 0.49% TAT 17 0.49% COR 15 0.43% 16OMT 15 0.43% FNS 14 0.4% F5H/CYP84A 14 0.4% ANS/LDOX 12 0.34% 8HGO 9 0.26% CPD/CYP90A1 9 0.26% CYP51G1 9 0.26% ROT3/CYP90C1 9 0.26% CHS 8 0.23% CCoAOMT 8 0.23% MPO 7 0.2% CNMT 7 0.2% ISY 7 0.2% TYDC_DDC 7 0.2% FPPS 7 0.2% DFR 6 0.17% PAL 6 0.17% HPPR 6 0.17% SQE 6 0.17% SQS/FDFT1 6 0.17% CYP719 5 0.14% AACT 5 0.14% GGPPS 5 0.14% CHI 4 0.11% CPR 4 0.11% MVD 4 0.11% HDR/IspH 4 0.11% HMGR 4 0.11% CYP80B1 3 0.09% CYP80F1 3 0.09% ODC 3 0.09% FK 3 0.09% DET2 3 0.09% SMO1/SMO2 3 0.09% MVK 3 0.09% DXS 3 0.09% TDC 2 0.06% FLS 2 0.06% HYD1 2 0.06% HDS/IspG 2 0.06% MCT/IspD 2 0.06% DXR 2 0.06% XMT_MXMT_DXMT 1 0.03% 6OMT_4OMT_SOMT 1 0.03% ADC 1 0.03% DWF1 1 0.03% DWF5 1 0.03% DWF7 1 0.03% CPI1 1 0.03% CMK/IspE 1 0.03% PMK 1 0.03% HMGS 1 0.03% MDS/IspF 1 0.03% IDI 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	433	19	UGT (184)	View species results
Alkaloid pathway	331	22	7DLGT (83)	View species results
Phenylpropanoid pathway	301	11	POD (115)	View species results
Flavonoid pathway	205	11	UFGT (147)	View species results
Rosmarinic acid pathway	116	7	C4H (54)	View species results
Steroid pathway	76	12	SMT1/SMT2/SMT3 (28)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1342	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	227	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CAS

Gene	Pathway	Family	Confidence	Status	Best Target
prunus_mira_Pmi01g0025	Steroid	CAS	medium	pass	CAS__00014__sp_Q9SXV6_CAS1_GLYGL
prunus_mira_Pmi01g0137	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
prunus_mira_Pmi01g0627	Steroid	CAS	medium	pass	CAS__00010__sp_Q8W3Z3_CAS2_BETPL
prunus_mira_Pmi01g0629	Steroid	CAS	medium	pass	CAS__00004__sp_O82139_CAS1_PANGI
prunus_mira_Pmi01g1052.2	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
prunus_mira_Pmi02g1953	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
prunus_mira_Pmi03g0256	Steroid	CAS	low	borderline	CAS__00004__sp_O82139_CAS1_PANGI
prunus_mira_Pmi03g0257	Steroid	CAS	medium	pass	CAS__00014__sp_Q9SXV6_CAS1_GLYGL
prunus_mira_Pmi03g0258	Steroid	CAS	low	borderline	CAS__00004__sp_O82139_CAS1_PANGI
prunus_mira_Pmi03g0259	Steroid	CAS	medium	pass	CAS__00013__sp_Q9SLP9_CAS1_LUFAE
prunus_mira_Pmi03g0261	Steroid	CAS	medium	pass	CAS__00005__sp_P38605_CAS1_ARATH
prunus_mira_Pmi03g0262	Steroid	CAS	medium	pass	CAS__00013__sp_Q9SLP9_CAS1_LUFAE
prunus_mira_Pmi03g2475	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi03g2477	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi03g2588	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g0292	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g0297	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1200	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1201	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1202	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1205	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1214	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1234	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1236	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1852	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi04g1894.1	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA
prunus_mira_Pmi05g2210	Steroid	CAS	medium	pass	CAS__00012__sp_Q9FN48_CAS_ARATH
prunus_mira_Pmi06g3548	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
prunus_mira_Pmi06g3549	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
prunus_mira_Pmi07g0300	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
prunus_mira_Pmi07g0628	Steroid	CAS	medium	pass	CAS__00010__sp_Q8W3Z3_CAS2_BETPL
prunus_mira_Pmi08g2554	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA