Prunus mira (prunus_mira)
Imported from atlas release summary for Prunus mira.
1462
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1462
Candidate Genes
C4H
6.52%
C3'H/CYP98A
5.92%
UGT
5.41%
BAHD
4.98%
7DLGT
4.49%
UFGT
4.38%
CYP76
4.18%
IFS
3.98%
Other Families
60.14%
More Families (97)
POD
122
3.49%
T3O
112
3.2%
4CL
111
3.18%
F3H
107
3.06%
DWF4/CYP90B1
85
2.43%
NMT
69
1.97%
H6H
68
1.95%
F3'H/CYP75B
67
1.92%
BR6OX2/CYP85A2
64
1.83%
CAD
59
1.69%
CODM/T6ODM
54
1.55%
STR
53
1.52%
GS
46
1.32%
SMT1/SMT2/SMT3
43
1.23%
BBE
40
1.14%
CSE
40
1.14%
TRI/TRII
38
1.09%
LAC
37
1.06%
CYP71
36
1.03%
SGD
35
1.0%
CYP90D1
34
0.97%
7DLH
33
0.94%
IFR
32
0.92%
CAS
32
0.92%
IO
31
0.89%
PYKS
29
0.83%
T16H
27
0.77%
HCT
27
0.77%
TPS
27
0.77%
ANR
26
0.74%
RAS
26
0.74%
GES
23
0.66%
BR6OX1/CYP85A1
23
0.66%
COMT
22
0.63%
PMT
21
0.6%
F3'5'H/CYP75A
21
0.6%
G8O/G8H
20
0.57%
LAMT
20
0.57%
NCS
19
0.54%
CCR
19
0.54%
SLS
17
0.49%
TAT
17
0.49%
COR
15
0.43%
16OMT
15
0.43%
FNS
14
0.4%
F5H/CYP84A
14
0.4%
ANS/LDOX
12
0.34%
8HGO
9
0.26%
CPD/CYP90A1
9
0.26%
CYP51G1
9
0.26%
ROT3/CYP90C1
9
0.26%
CHS
8
0.23%
CCoAOMT
8
0.23%
MPO
7
0.2%
CNMT
7
0.2%
ISY
7
0.2%
TYDC_DDC
7
0.2%
FPPS
7
0.2%
DFR
6
0.17%
PAL
6
0.17%
HPPR
6
0.17%
SQE
6
0.17%
SQS/FDFT1
6
0.17%
CYP719
5
0.14%
AACT
5
0.14%
GGPPS
5
0.14%
CHI
4
0.11%
CPR
4
0.11%
MVD
4
0.11%
HDR/IspH
4
0.11%
HMGR
4
0.11%
CYP80B1
3
0.09%
CYP80F1
3
0.09%
ODC
3
0.09%
FK
3
0.09%
DET2
3
0.09%
SMO1/SMO2
3
0.09%
MVK
3
0.09%
DXS
3
0.09%
TDC
2
0.06%
FLS
2
0.06%
HYD1
2
0.06%
HDS/IspG
2
0.06%
MCT/IspD
2
0.06%
DXR
2
0.06%
XMT_MXMT_DXMT
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
ADC
1
0.03%
DWF1
1
0.03%
DWF5
1
0.03%
DWF7
1
0.03%
CPI1
1
0.03%
CMK/IspE
1
0.03%
PMK
1
0.03%
HMGS
1
0.03%
MDS/IspF
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 433 | 19 | UGT (184) | View species results |
| Alkaloid pathway | 331 | 22 | 7DLGT (83) | View species results |
| Phenylpropanoid pathway | 301 | 11 | POD (115) | View species results |
| Flavonoid pathway | 205 | 11 | UFGT (147) | View species results |
| Rosmarinic acid pathway | 116 | 7 | C4H (54) | View species results |
| Steroid pathway | 76 | 12 | SMT1/SMT2/SMT3 (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1342 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 227 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| prunus_mira_Pmi01g2637 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| prunus_mira_Pmi01g3688 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi02g0290 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi02g1248 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| prunus_mira_Pmi02g1855 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| prunus_mira_Pmi02g2567 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| prunus_mira_Pmi03g0049 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi03g0066 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| prunus_mira_Pmi03g3373 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi04g0125 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| prunus_mira_Pmi04g1096 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| prunus_mira_Pmi04g1282 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi05g0334 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi05g1668 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| prunus_mira_Pmi05g1963 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi05g1964 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi06g0416 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi06g0653 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| prunus_mira_Pmi06g0654 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| prunus_mira_Pmi06g0655 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| prunus_mira_Pmi06g0658 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| prunus_mira_Pmi06g0662 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| prunus_mira_Pmi06g1383 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi06g1386 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi06g1387 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi06g1388 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi06g1964 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi06g2346 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi06g2698 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| prunus_mira_Pmi06g3036 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| prunus_mira_Pmi06g3442 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| prunus_mira_Pmi06g3443 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| prunus_mira_Pmi07g1260 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi07g1261 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| prunus_mira_Pmi08g0614 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| prunus_mira_Pmi08g0616 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| prunus_mira_Pmi08g1398 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| prunus_mira_Pmi08g2668 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |