Prunus mira (prunus_mira)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.62% Alkaloid pathway 22.64% Phenylpropanoid pathway 20.59% Flavonoid pathway 14.02% Rosmarinic acid pathway 7.93% Steroid pathway 5.2%

Family Distribution

1462 Candidate Genes

C4H 6.52% C3'H/CYP98A 5.92% UGT 5.41% BAHD 4.98% 7DLGT 4.49% UFGT 4.38% CYP76 4.18% IFS 3.98%

Other Families 60.14%

More Families (97)

POD 122 3.49% T3O 112 3.2% 4CL 111 3.18% F3H 107 3.06% DWF4/CYP90B1 85 2.43% NMT 69 1.97% H6H 68 1.95% F3'H/CYP75B 67 1.92% BR6OX2/CYP85A2 64 1.83% CAD 59 1.69% CODM/T6ODM 54 1.55% STR 53 1.52% GS 46 1.32% SMT1/SMT2/SMT3 43 1.23% BBE 40 1.14% CSE 40 1.14% TRI/TRII 38 1.09% LAC 37 1.06% CYP71 36 1.03% SGD 35 1.0% CYP90D1 34 0.97% 7DLH 33 0.94% IFR 32 0.92% CAS 32 0.92% IO 31 0.89% PYKS 29 0.83% T16H 27 0.77% HCT 27 0.77% TPS 27 0.77% ANR 26 0.74% RAS 26 0.74% GES 23 0.66% BR6OX1/CYP85A1 23 0.66% COMT 22 0.63% PMT 21 0.6% F3'5'H/CYP75A 21 0.6% G8O/G8H 20 0.57% LAMT 20 0.57% NCS 19 0.54% CCR 19 0.54% SLS 17 0.49% TAT 17 0.49% COR 15 0.43% 16OMT 15 0.43% FNS 14 0.4% F5H/CYP84A 14 0.4% ANS/LDOX 12 0.34% 8HGO 9 0.26% CPD/CYP90A1 9 0.26% CYP51G1 9 0.26% ROT3/CYP90C1 9 0.26% CHS 8 0.23% CCoAOMT 8 0.23% MPO 7 0.2% CNMT 7 0.2% ISY 7 0.2% TYDC_DDC 7 0.2% FPPS 7 0.2% DFR 6 0.17% PAL 6 0.17% HPPR 6 0.17% SQE 6 0.17% SQS/FDFT1 6 0.17% CYP719 5 0.14% AACT 5 0.14% GGPPS 5 0.14% CHI 4 0.11% CPR 4 0.11% MVD 4 0.11% HDR/IspH 4 0.11% HMGR 4 0.11% CYP80B1 3 0.09% CYP80F1 3 0.09% ODC 3 0.09% FK 3 0.09% DET2 3 0.09% SMO1/SMO2 3 0.09% MVK 3 0.09% DXS 3 0.09% TDC 2 0.06% FLS 2 0.06% HYD1 2 0.06% HDS/IspG 2 0.06% MCT/IspD 2 0.06% DXR 2 0.06% XMT_MXMT_DXMT 1 0.03% 6OMT_4OMT_SOMT 1 0.03% ADC 1 0.03% DWF1 1 0.03% DWF5 1 0.03% DWF7 1 0.03% CPI1 1 0.03% CMK/IspE 1 0.03% PMK 1 0.03% HMGS 1 0.03% MDS/IspF 1 0.03% IDI 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	433	19	UGT (184)	View species results
Alkaloid pathway	331	22	7DLGT (83)	View species results
Phenylpropanoid pathway	301	11	POD (115)	View species results
Flavonoid pathway	205	11	UFGT (147)	View species results
Rosmarinic acid pathway	116	7	C4H (54)	View species results
Steroid pathway	76	12	SMT1/SMT2/SMT3 (28)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1342	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	227	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
prunus_mira_Pmi06g0366	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
prunus_mira_Pmi06g1054	Alkaloid	NMT	low	borderline	NMT__00016__sp_F4JNX3_CMKMT_ARATH
prunus_mira_Pmi06g1102	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
prunus_mira_Pmi06g3679	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
prunus_mira_Pmi07g0197	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
prunus_mira_Pmi07g0336	Alkaloid	NMT	medium	pass	NMT__00049__sp_Q93YF5_SUVH1_TOBAC
prunus_mira_Pmi07g1458	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
prunus_mira_Pmi07g1508	Alkaloid	NMT	medium	pass	NMT__00018__sp_I1M2U5_NAMT1_SOYBN
prunus_mira_Pmi07g1510	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
prunus_mira_Pmi07g1586	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
prunus_mira_Pmi07g1747	Alkaloid	NMT	medium	pass	NMT__00021__sp_O64827_SUVR5_ARATH
prunus_mira_Pmi07g1973	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
prunus_mira_Pmi07g2132	Alkaloid	NMT	medium	pass	NMT__00054__sp_Q9FF80_SUVH1_ARATH
prunus_mira_Pmi07g2404	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
prunus_mira_Pmi07g2640	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
prunus_mira_Pmi07g2970	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
prunus_mira_Pmi08g0402	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
prunus_mira_Pmi08g2315	Alkaloid	NMT	medium	pass	NMT__00055__sp_Q9FNC7_SUVR2_ARATH
prunus_mira_Pmi08g2826	Alkaloid	NMT	medium	pass	NMT__00069__sp_Q9ZSM8_EZA1_ARATH