Ptilidium pulcherrimum (ptilidium_pulcherrimum)
Imported from atlas release summary for Ptilidium pulcherrimum.
583
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
583
Candidate Genes
C4H
6.71%
4CL
5.82%
C3'H/CYP98A
5.76%
BAHD
4.76%
CYP76
4.59%
POD
4.47%
GS
3.35%
NMT
3.0%
Other Families
61.53%
More Families (95)
IFS
50
2.94%
STR
49
2.88%
DWF4/CYP90B1
48
2.82%
T3O
38
2.24%
F3H
37
2.18%
IFR
35
2.06%
PAL
30
1.76%
BR6OX2/CYP85A2
30
1.76%
T16H
29
1.71%
F3'5'H/CYP75A
29
1.71%
TRI/TRII
28
1.65%
HCT
28
1.65%
RAS
27
1.59%
UGT
27
1.59%
G8O/G8H
26
1.53%
F3'H/CYP75B
26
1.53%
CAD
25
1.47%
H6H
21
1.24%
CAS
18
1.06%
IO
17
1.0%
FNS
17
1.0%
COR
16
0.94%
7DLGT
16
0.94%
CSE
15
0.88%
CYP71
15
0.88%
NCS
13
0.76%
SMT1/SMT2/SMT3
13
0.76%
SGD
12
0.71%
COMT
12
0.71%
TPS
12
0.71%
CODM/T6ODM
11
0.65%
SLS
10
0.59%
CNMT
10
0.59%
LAMT
10
0.59%
UFGT
10
0.59%
PYKS
9
0.53%
ANR
9
0.53%
F5H/CYP84A
9
0.53%
CPR
9
0.53%
TAT
9
0.53%
CYP90D1
9
0.53%
GES
8
0.47%
LAC
8
0.47%
CPD/CYP90A1
8
0.47%
PMT
7
0.41%
AACT
7
0.41%
8HGO
6
0.35%
ISY
6
0.35%
ANS/LDOX
6
0.35%
CCR
6
0.35%
HPPR
6
0.35%
ADC
5
0.29%
7DLH
5
0.29%
SQS/FDFT1
5
0.29%
FPPS
5
0.29%
CYP80F1
4
0.24%
CYP80B1
4
0.24%
DFR
4
0.24%
CYP51G1
4
0.24%
BR6OX1/CYP85A1
4
0.24%
FK
4
0.24%
GGPPS
4
0.24%
MPO
3
0.18%
16OMT
3
0.18%
6OMT_4OMT_SOMT
3
0.18%
CHI
3
0.18%
CCoAOMT
3
0.18%
SQE
3
0.18%
HYD1
3
0.18%
DWF1
3
0.18%
MCT/IspD
3
0.18%
MVK
3
0.18%
CMK/IspE
3
0.18%
DXS
3
0.18%
TDC
2
0.12%
CHS
2
0.12%
DET2
2
0.12%
ROT3/CYP90C1
2
0.12%
SMO1/SMO2
2
0.12%
DWF5
2
0.12%
MVD
2
0.12%
IDI
2
0.12%
HMGR
2
0.12%
TYDC_DDC
1
0.06%
ODC
1
0.06%
XMT_MXMT_DXMT
1
0.06%
BBE
1
0.06%
FLS
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
HDS/IspG
1
0.06%
PMK
1
0.06%
HDR/IspH
1
0.06%
HMGS
1
0.06%
DXR
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 164 | 11 | POD (71) | View species results |
| Alkaloid pathway | 124 | 18 | NMT (20) | View species results |
| Terpenoid pathway | 114 | 18 | BAHD (44) | View species results |
| Rosmarinic acid pathway | 78 | 7 | 4CL (21) | View species results |
| Flavonoid pathway | 59 | 11 | 4CL (21) | View species results |
| Steroid pathway | 44 | 12 | CAS (17) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 657 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 136 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ppul1460002740 | Phenylpropanoid | POD | low | borderline | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| Ppul2740005960 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Ppul2940006550 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Ppul2940006560 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Ppul3474570009550 | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| Ppul4026470022500 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Ppul4893770032730 | Phenylpropanoid | POD | low | borderline | POD__00017__sp_Q75SY5_PRXQ_GENTR |
| Ppul4916480035200 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Ppul5061170039860 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Ppul5265310044320 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Ppul5278310045640 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Ppul5382280052600 | Phenylpropanoid | POD | medium | pass | POD__00025__sp_Q9SRZ4_PRX2C_ARATH |
| Ppul5516110061710 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Ppul5540064330 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Ppul5553940067200 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Ppul5571940068890 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Ppul5590380071830 | Phenylpropanoid | POD | medium | pass | POD__00003__sp_A9PCL4_PRX2_POPTR |
| Ppul5635310081450 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Ppul5641450083240 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Ppul5658020086770 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Ppul5658270086850 | Phenylpropanoid | POD | medium | pass | POD__00008__sp_P52574_REHY_SYNRU |
| Ppul5659580087280 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Ppul5667290089540 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Ppul5667670089640 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Ppul5669320090390 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| Ppul5672830091260 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Ppul5675110092000 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Ppul5680250093390 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Ppul5686880094980 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Ppul5689670096310 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| Ppul5699230099590 | Phenylpropanoid | POD | medium | pass | POD__00018__sp_Q8H0V5_OCP3_ARATH |
| Ppul5699380099700 | Phenylpropanoid | POD | medium | pass | POD__00003__sp_A9PCL4_PRX2_POPTR |
| Ppul5700580100260 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Ppul5707880102650 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Ppul5708890102970 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Ppul5712910104500 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Ppul5723050109430 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Ppul5724610110080 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Ppul5725580110550 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| Ppul5725830110660 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Ppul5728250111780 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| Ppul5733040113990 | Phenylpropanoid | POD | medium | pass | POD__00008__sp_P52574_REHY_SYNRU |
| Ppul5746540120880 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Ppul5749090122430 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| Ppul5749200122540 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Ppul5749290122610 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Ppul5760040128420 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Ppul5763680130660 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Ppul5769250134820 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| Ppul5769770135040 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |