Ptilidium pulcherrimum (ptilidium_pulcherrimum)
Imported from atlas release summary for Ptilidium pulcherrimum.
583
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
583
Candidate Genes
C4H
6.71%
4CL
5.82%
C3'H/CYP98A
5.76%
BAHD
4.76%
CYP76
4.59%
POD
4.47%
GS
3.35%
NMT
3.0%
Other Families
61.53%
More Families (95)
IFS
50
2.94%
STR
49
2.88%
DWF4/CYP90B1
48
2.82%
T3O
38
2.24%
F3H
37
2.18%
IFR
35
2.06%
PAL
30
1.76%
BR6OX2/CYP85A2
30
1.76%
T16H
29
1.71%
F3'5'H/CYP75A
29
1.71%
TRI/TRII
28
1.65%
HCT
28
1.65%
RAS
27
1.59%
UGT
27
1.59%
G8O/G8H
26
1.53%
F3'H/CYP75B
26
1.53%
CAD
25
1.47%
H6H
21
1.24%
CAS
18
1.06%
IO
17
1.0%
FNS
17
1.0%
COR
16
0.94%
7DLGT
16
0.94%
CSE
15
0.88%
CYP71
15
0.88%
NCS
13
0.76%
SMT1/SMT2/SMT3
13
0.76%
SGD
12
0.71%
COMT
12
0.71%
TPS
12
0.71%
CODM/T6ODM
11
0.65%
SLS
10
0.59%
CNMT
10
0.59%
LAMT
10
0.59%
UFGT
10
0.59%
PYKS
9
0.53%
ANR
9
0.53%
F5H/CYP84A
9
0.53%
CPR
9
0.53%
TAT
9
0.53%
CYP90D1
9
0.53%
GES
8
0.47%
LAC
8
0.47%
CPD/CYP90A1
8
0.47%
PMT
7
0.41%
AACT
7
0.41%
8HGO
6
0.35%
ISY
6
0.35%
ANS/LDOX
6
0.35%
CCR
6
0.35%
HPPR
6
0.35%
ADC
5
0.29%
7DLH
5
0.29%
SQS/FDFT1
5
0.29%
FPPS
5
0.29%
CYP80F1
4
0.24%
CYP80B1
4
0.24%
DFR
4
0.24%
CYP51G1
4
0.24%
BR6OX1/CYP85A1
4
0.24%
FK
4
0.24%
GGPPS
4
0.24%
MPO
3
0.18%
16OMT
3
0.18%
6OMT_4OMT_SOMT
3
0.18%
CHI
3
0.18%
CCoAOMT
3
0.18%
SQE
3
0.18%
HYD1
3
0.18%
DWF1
3
0.18%
MCT/IspD
3
0.18%
MVK
3
0.18%
CMK/IspE
3
0.18%
DXS
3
0.18%
TDC
2
0.12%
CHS
2
0.12%
DET2
2
0.12%
ROT3/CYP90C1
2
0.12%
SMO1/SMO2
2
0.12%
DWF5
2
0.12%
MVD
2
0.12%
IDI
2
0.12%
HMGR
2
0.12%
TYDC_DDC
1
0.06%
ODC
1
0.06%
XMT_MXMT_DXMT
1
0.06%
BBE
1
0.06%
FLS
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
HDS/IspG
1
0.06%
PMK
1
0.06%
HDR/IspH
1
0.06%
HMGS
1
0.06%
DXR
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 164 | 11 | POD (71) | View species results |
| Alkaloid pathway | 124 | 18 | NMT (20) | View species results |
| Terpenoid pathway | 114 | 18 | BAHD (44) | View species results |
| Rosmarinic acid pathway | 78 | 7 | 4CL (21) | View species results |
| Flavonoid pathway | 59 | 11 | 4CL (21) | View species results |
| Steroid pathway | 44 | 12 | CAS (17) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 657 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 136 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ppul10430001580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul1280002170 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul1280002200 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul1290002210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul1290002220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul4370028680 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5329990049150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5433710054930 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5495990060170 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5504490060740 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5548010066060 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppul5631980080690 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppul5653450085970 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5660520087620 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5668370089880 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5687060095060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5712160104350 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5732720113860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5733550114400 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppul5734220114680 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5759210127810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5774960138810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5776110139600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5782330144540 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppul5783420145370 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5797040157500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5797130157600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5797240157670 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5797830158280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5805430166210 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5807940169300 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5809950171580 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5811880173740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5814270176370 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5815840178250 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5821420185150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5826320191710 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5826890192660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5829980197180 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5831320199070 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5832130200290 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5836440207700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5836860208340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5837040208670 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5946010219470 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul5946020219500 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul6750225660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul7260227090 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppul8870231920 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |