Ptilidium pulcherrimum (ptilidium_pulcherrimum)
Imported from atlas release summary for Ptilidium pulcherrimum.
906
Candidate Protein Records
583
Pathway-Level Records
1700
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1700
Family-Level Calls
C4H
6.71%
4CL
5.82%
C3'H/CYP98A
5.76%
BAHD
4.76%
CYP76
4.59%
POD
4.47%
GS
3.35%
NMT
3.0%
Other Families
61.53%
More Families (95)
IFS
50
2.94%
STR
49
2.88%
DWF4/CYP90B1
48
2.82%
T3O
38
2.24%
F3H
37
2.18%
IFR
35
2.06%
PAL
30
1.76%
BR6OX2/CYP85A2
30
1.76%
T16H
29
1.71%
F3'5'H/CYP75A
29
1.71%
TRI/TRII
28
1.65%
HCT
28
1.65%
RAS
27
1.59%
UGT
27
1.59%
G8O/G8H
26
1.53%
F3'H/CYP75B
26
1.53%
CAD
25
1.47%
H6H
21
1.24%
CAS
18
1.06%
IO
17
1.0%
FNS
17
1.0%
COR
16
0.94%
7DLGT
16
0.94%
CSE
15
0.88%
CYP71
15
0.88%
NCS
13
0.76%
SMT1/SMT2/SMT3
13
0.76%
SGD
12
0.71%
COMT
12
0.71%
TPS
12
0.71%
CODM/T6ODM
11
0.65%
SLS
10
0.59%
CNMT
10
0.59%
LAMT
10
0.59%
UFGT
10
0.59%
PYKS
9
0.53%
ANR
9
0.53%
F5H/CYP84A
9
0.53%
CPR
9
0.53%
TAT
9
0.53%
CYP90D1
9
0.53%
GES
8
0.47%
LAC
8
0.47%
CPD/CYP90A1
8
0.47%
PMT
7
0.41%
AACT
7
0.41%
8HGO
6
0.35%
ISY
6
0.35%
ANS/LDOX
6
0.35%
CCR
6
0.35%
HPPR
6
0.35%
ADC
5
0.29%
7DLH
5
0.29%
SQS/FDFT1
5
0.29%
FPPS
5
0.29%
CYP80F1
4
0.24%
CYP80B1
4
0.24%
DFR
4
0.24%
CYP51G1
4
0.24%
BR6OX1/CYP85A1
4
0.24%
FK
4
0.24%
GGPPS
4
0.24%
MPO
3
0.18%
16OMT
3
0.18%
6OMT_4OMT_SOMT
3
0.18%
CHI
3
0.18%
CCoAOMT
3
0.18%
SQE
3
0.18%
HYD1
3
0.18%
DWF1
3
0.18%
MCT/IspD
3
0.18%
MVK
3
0.18%
CMK/IspE
3
0.18%
DXS
3
0.18%
TDC
2
0.12%
CHS
2
0.12%
DET2
2
0.12%
ROT3/CYP90C1
2
0.12%
SMO1/SMO2
2
0.12%
DWF5
2
0.12%
MVD
2
0.12%
IDI
2
0.12%
HMGR
2
0.12%
TYDC_DDC
1
0.06%
ODC
1
0.06%
XMT_MXMT_DXMT
1
0.06%
BBE
1
0.06%
FLS
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
HDS/IspG
1
0.06%
PMK
1
0.06%
HDR/IspH
1
0.06%
HMGS
1
0.06%
DXR
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 164 | 11 | POD (71) | View species results |
| Alkaloid pathway | 124 | 18 | NMT (20) | View species results |
| Terpenoid pathway | 114 | 18 | BAHD (44) | View species results |
| Rosmarinic acid pathway | 78 | 7 | 4CL (21) | View species results |
| Flavonoid pathway | 59 | 11 | 4CL (21) | View species results |
| Steroid pathway | 44 | 12 | CAS (17) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 657 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 136 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Ppul5803950164750 | Alkaloid | PMT | medium | borderline |
| Ppul5809830171460 | Alkaloid | PMT | medium | pass |
| Ppul5813570175660 | Alkaloid | PMT | low | borderline |
| Ppul5827920194470 | Alkaloid | PMT | low | borderline |
| Ppul2130004320 | Alkaloid | PYKS | high | pass |
| Ppul4919040035570 | Alkaloid | PYKS | low | borderline |
| Ppul5603140075040 | Alkaloid | PYKS | low | borderline |
| Ppul5629650080260 | Alkaloid | PYKS | low | borderline |
| Ppul5632570080810 | Alkaloid | PYKS | low | borderline |
| Ppul5660450087590 | Alkaloid | PYKS | low | borderline |
| Ppul5741990118510 | Alkaloid | PYKS | low | borderline |
| Ppul5746550120890 | Alkaloid | PYKS | low | borderline |
| Ppul5836730208200 | Alkaloid | PYKS | low | borderline |
| Ppul2760006080 | Alkaloid | SGD | low | borderline |
| Ppul4314380028510 | Alkaloid | SGD | medium | pass |
| Ppul5290047030 | Alkaloid | SGD | medium | pass |
| Ppul5547270065850 | Alkaloid | SGD | medium | pass |
| Ppul5596930073200 | Alkaloid | SGD | medium | pass |
| Ppul5656910086600 | Alkaloid | SGD | low | borderline |
| Ppul5734820115080 | Alkaloid | SGD | medium | pass |
| Ppul5743380119150 | Alkaloid | SGD | medium | pass |
| Ppul5745220120240 | Alkaloid | SGD | medium | pass |
| Ppul5754800125360 | Alkaloid | SGD | medium | pass |
| Ppul5776570140120 | Alkaloid | SGD | medium | pass |
| Ppul5778870141810 | Alkaloid | SGD | medium | pass |
| Ppul1050001780 | Alkaloid | SLS | medium | borderline |
| Ppul490520034720 | Alkaloid | SLS | medium | borderline |
| Ppul5282210046000 | Alkaloid | SLS | medium | borderline |
| Ppul5555020067420 | Alkaloid | SLS | medium | borderline |
| Ppul5694910098190 | Alkaloid | SLS | low | borderline |
| Ppul5804920165640 | Alkaloid | SLS | medium | borderline |
| Ppul5874800213430 | Alkaloid | SLS | medium | borderline |
| Ppul5874810213440 | Alkaloid | SLS | medium | borderline |
| Ppul5927060216260 | Alkaloid | SLS | low | borderline |
| Ppul5927070216290 | Alkaloid | SLS | low | borderline |
| Ppul10430001580 | Alkaloid | STR | low | borderline |
| Ppul1280002170 | Alkaloid | STR | low | borderline |
| Ppul1280002200 | Alkaloid | STR | low | borderline |
| Ppul1290002210 | Alkaloid | STR | low | borderline |
| Ppul1290002220 | Alkaloid | STR | low | borderline |
| Ppul4370028680 | Alkaloid | STR | low | borderline |
| Ppul5329990049150 | Alkaloid | STR | low | borderline |
| Ppul5433710054930 | Alkaloid | STR | medium | pass |
| Ppul5495990060170 | Alkaloid | STR | medium | pass |
| Ppul5504490060740 | Alkaloid | STR | medium | pass |
| Ppul5548010066060 | Alkaloid | STR | medium | pass |
| Ppul5631980080690 | Alkaloid | STR | medium | pass |
| Ppul5653450085970 | Alkaloid | STR | low | borderline |
| Ppul5660520087620 | Alkaloid | STR | low | borderline |
| Ppul5668370089880 | Alkaloid | STR | medium | pass |